Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq121 223 4e-53 seq692 127 2e-24 >seq121 Length=191400 Score = 223 bits (246), Expect = 4e-53 Identities = 598/909 (66%), Gaps = 7/909 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| || || |||| ||||| || || || |||||| || ||| || | Sbjct 135313 TGTGTCGCAAATACTCTTCCAAACATTTCACTGCAAAAGGGTCAACATCAGTGTCAAACT 135254 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| | ||||| ||| || | Sbjct 135253 TATTGGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTTAGATCTCCTACCCCAAAAA 135197 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | || || || |||| || ||||| | || ||||| | || | Sbjct 135196 CACAGACAGAGCGAACATGAACTCCACTGCATGGTGGGTAGGGTGCACCTTTGGATACAT 135137 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 | ||||| ||||||||||||| ||||| | ||| | || | |||||| || |||| Sbjct 135136 CCCCTTCAAAGTACTGCCACTTGACAAATCGGGCCAGTGCATTCATGTCAGAAACATCGT 135077 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 |||||| || || | ||| ||||| || || | | || | ||| | ||| |||||| Sbjct 135076 ATTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGCGATTCTCTGAATGGTTGCCCAC 135018 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 | || || || |||||||| ||||| || | |||||| ||||||| ||| ||| Sbjct 135017 AAGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCATTCAATGAACTTAAGTATTTTGCTG 134958 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | |||| || | |||| | || ||||| || || || || || || Sbjct 134957 CTTTCTAATACGTATTCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 134898 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | ||||| || ||||| | || | Sbjct 134897 ATTGGAGTACTGAGAGGTGGTAGTTGNTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 134838 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | |||| | || |||||||| || || | ||||| ||| || || Sbjct 134837 ATAACCTCGTGGTGTTTTTTCCACCTTACTTCTTTATTAACAGGCATTTTTTCTGTTTCC 134778 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| ||||| | || | ||| | | || || || || |||| ||||| | Sbjct 134777 AAGCTGTTTGCACCTTTAAGGGCTTTTAATTTCTCTACAATTTCCTGGTTGGTCTTTATT 134718 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | |||||| | ||| ||||| || | || || || Sbjct 134717 GGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTTTGAACTTCTTCTGTAGAGA 134658 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| ||||||||||| | |||||| ||||| || || || ||||| Sbjct 134657 TCTTTCATGCAGTTAATGTCTGCCTGCACTCTGCTCCATGAAGCATATACAACACTCTCT 134598 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | ||| | | |||||| ||||| ||||| || || |||||| ||| | ||| || Sbjct 134597 AACTGACTAGAAATAAAGACATTATCAAAACATGAGACTATTCCCCTCACAG-CAGCAAA 134539 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| ||| || || | ||| || | |||||||| || ||||| Sbjct 134538 AAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 134479 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | ||| || | || || | |||||| || || |||| | ||| || ||||| |||| Sbjct 134478 TGACCTTAGAAGTCTGTCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGCTAC 134419 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 134418 TGGAAATTC 134410 >seq692 Length=1742483 Score = 127 bits (140), Expect = 2e-24 Identities = 603/940 (64%), Gaps = 34/940 (4%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| |||| || || ||||||||||||| ||| |||| || |||||| Sbjct 1248297 CTGTGGCGCAAGTGCTCCTCCAGACATTGGATAGCGGCGTCGTCCACCAAGGGGTCGAAC 1248238 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || |||||| ||||||| || ||| | Sbjct 1248237 TTGTTGGCCAAGAGGTGGTG---CTGCTGGAGCATCCAGGGCACGTCGCCCACGCCGTAG 1248181 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 | ||||||| || ||| |||| |||| || ||||| | || || || | Sbjct 1248180 ATACAGACGGCGCGCTGATGCTGGCCGGTGCAGGGTGGGTAGGGCGCGCCCTTGCTGGTG 1248121 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || ||||| |||||| || | | || | || | |||||| ||| | | Sbjct 1248120 TCCCCCTCCAGGTACTCCCACTTGACCAGACGGGGCAGGGCGTTCATGTCCGAGAGCTGG 1248061 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| | ||| ||||| || || |||| ||| | || |||||||| Sbjct 1248060 AACTTGTCGTTCGGGGGCATGGCGCCGGGCACACCAGGCACACGGTTGAGCGTGGCCCAG 1248001 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402 | ||| ||||| |||||||| |||||||| | ||| || | ||||| || || | Sbjct 1248000 ACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGCG-CTGCGGG 1247942 Query 160403 GTCC-CGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGA 160461 |||| || || | ||| ||| ||| | ||| | || | ||| ||| | || | || Sbjct 1247941 GTCCTCGAAG-ATGTGCTGCACGAAGGCACGGGTGATCACGACGTATGCGTTACCAGTGA 1247883 Query 160462 ATAT-CGGTA--TGGGTATAGGCGGC-GTGTCTTTGT-CCTGACCGGTGTTAGACACCAC 160516 | || |||| || | ||||||| || |||| || ||| |||| ||| | Sbjct 1247882 ACATGGGGTAGTTGTGGGGAGGCGGCAGTTTCTTGGTGGCTGTCCGGAAGATGAC----C 1247827 Query 160517 TCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT-T 160575 | || || | ||| | | | ||| | | |||| | | | | || | | Sbjct 1247826 TGCT----GCACCTTGTGGTGGTATTGCCAGCGCTGCTGCTTGAGTGCCGAC-GGCTTCT 1247772 Query 160576 CCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCG 160635 ||| ||| | ||||| || | ||| ||||| ||| ||||| ||||| Sbjct 1247771 CCGACTCCATGCTGTTCCGCCCCTGCAGCACCTTCAGGGCACGGACAATCTCGGCGTTCG 1247712 Query 160636 TCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGT 160695 |||||| || || || || ||||| ||| | ||||| | ||| | | | | Sbjct 1247711 TCTTGATGGGGAAATCAGTGCCGCAGGTGTTGAGGACGTAGTGCCA---GGGAATNGGAT 1247655 Query 160696 CGTG---CAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACA 160752 || ||||||| |||||| || | || ||||||| ||| |||||| || || | Sbjct 1247654 TCTGCAACAGGTCCTGCATGCAGTTGAGGTCGGCCTGCAGCCGGGACCAGGAGGCATAGA 1247595 Query 160753 CTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCA 160812 | ||||| || || | || |||||||||||||| ||| || | ||||| || || Sbjct 1247594 CCACGTTTTCCAGGTGGCTCGCCACAAAGACGTTGGGGAAGCAGGCTACGATGGCCCGCA 1247535 Query 160813 CCG---CCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCT 160869 | | || | ||| | || | ||| || | ||| ||||| || | |||| Sbjct 1247534 CGGCTTCCTGGAAG-GCGGCT--GGGGACTTGTTATCAATGTGGACGCAGTAGACATTCT 1247478 Query 160870 GAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGA 160929 | || || |||| || || || | || |||||||||||| || || | |||||| || | Sbjct 1247477 GGGGGGCATAGAGGGACCGCAGGAGCCGCTCGAACATCTCAATTTTGTTATGGATGACCA 1247418 Query 160930 TAGAGTAGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 | |||||||| || || ||||| ||| || | ||||| Sbjct 1247417 TGGAGTAGGCGATGGGGAACTCTTCCTCTTCCTGGCTCAG 1247378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577195880344320