Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq37 361 7e-95 seq1558 187 3e-42 seq2507 102 1e-16 seq2936 86.0 8e-12 seq155 84.2 3e-11 >seq37 Length=2074313 Score = 361 bits (400), Expect = 7e-95 Identities = 1050/1597 (66%), Gaps = 37/1597 (2%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || ||||| | || ||| Sbjct 954520 GCAATCGGCATCGACCTGGGCACCACGTACTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 954579 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | ||||||||||| ||||| || || || || || ||||| || Sbjct 954580 GTGGAGATCATTGCCAATGACCAAGGGAACCGCACCACACCCAGCTATGTGGCCTTCACT 954639 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| | || ||||| || || || ||| ||||||||||||| ||| Sbjct 954640 GATACAGAGCGCCTCATCGGTGATGCAGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 954699 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||| || |||||||| || || ||||||| | || | || || | Sbjct 954700 ACCATCTTTGATGCTAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCC 954759 Query 195539 GATATAAAGGACTGGTC-TTATGAAGTTGTTCCCGGTG--TGGCTGAT--AAGCCTATGA 195593 ||||| ||| ||||| | || | ||| |||| || | | ||||| | | Sbjct 954760 GATATGAAGCACTGGCCCTTCCG----TGT----GGTGAATGACAGCGGCAAGCCCAAGG 954811 Query 195594 TTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC-GAAGAAATTTCGTCTATG 195652 | | || || | | || |||| ||| | ||| |||| || || || |||||| Sbjct 954812 TACAAGTGGAGTACAAGGGGGAGATGAAG-ACTTTCTTCCCAGAGGAGATCAGCTCTATG 954870 Query 195653 GTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCA 195712 || | | ||||||||||||| ||| || | | |||| | ||| | |||| Sbjct 954871 GTCCTAACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAAGTGCAGAATGCC 954930 Query 195713 GTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCT 195772 || | || || ||||||||||||| || || || || ||||| || || || |||| Sbjct 954931 GTCATTACAGTGCCTGCTTACTTCAACGACTCCCAGCGCCAGGCCACCAAAGATGCTGGC 954990 Query 195773 GCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGC 195831 | || | || || || ||| | | ||||||||||| || ||||| ||||| || || Sbjct 954991 ACCATCACTGGCCTTAA-TGTGATGCGTATTATCAATGAGCCCACAGCAGCTGCTATAGC 955049 Query 195832 TTATGGTCTGGACAAGAA-----CAAGGAC-GAAGATAAAAATGTATTGATCTTTGATCT 195885 ||||| |||||||||| | | | | || || ||||| | |||||||| | Sbjct 955050 CTATGGCTTGGACAAGAAGGGTACTCGAGCTGGTGAGAAGAATGTGCTCATCTTTGACTT 955109 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 || || ||||| || ||||| || | || | ||||| | ||| || || || || || Sbjct 955110 GGGAGGGGGTACTTTCGATGTGTCCATCCTTACCATTGAGGATGGAATCTTTGAGGTGAA 955169 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA 196005 | | || |||||||| || ||||| ||||| || || || || ||| | | || Sbjct 955170 GTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCA 955229 Query 196006 TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCT 196065 ||| || || ||| || ||| | ||| || ||| |||| || | || | Sbjct 955230 TTTTGTGGAAGAATTCAAGCGTAAGCACAAGCGTGACATTGCTGGCAACAAGCGAGCGGT 955289 Query 196066 TCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAAC 196125 | ||||| | || || ||||| | || || || || ||| ||| | | ||| | Sbjct 955290 GAGGCGGCTGCGTACAGCTTGTGAGAGGGCAAAGCGCACCCTCAGCTCTTCCACACAAGC 955349 Query 196126 AATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGC 196185 | |||||||||| || | || || || ||||||||||| || | ||||||||||| Sbjct 955350 TAGCATTGAGATTGACTCCCTCTTCGAGGGTATTGACTTCTACACCTCCATTACCCGTGC 955409 Query 196186 ACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGT 196245 || ||||| ||| | || | ||| | || | |||| || || || | | Sbjct 955410 CCGCTTTGAGGAGCTCAATGCAGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAGGC 955469 Query 196246 ACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 || ||||| || ||| | || ||| || | | || ||||| || ||||| || || Sbjct 955470 TCTGCGTGATGCCAAGCTAGACAAGGGCCAGATCCAAGAGATTGTGCTGGTGGGTGGCTC 955529 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365 ||||||||||| ||||| ||| || |||| |||||||||| ||||| | || Sbjct 955530 TACCCGTATTCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAA 955589 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 ||| | |||||||| ||||| || |||||||| ||||| || || || || ||||| Sbjct 955590 CAAGAGCATCAACCCCGATGAGGCTGTTGCTTACGGTGCTGCTGTGCAAGCAGCTAT--C 955647 Query 196426 CTCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 |||| | | ||||| | | || || || ||||| ||||| | ||||| | || | Sbjct 955648 CTCATG-GGAGACAAGTCTGAGAATGTGCAGGATCTGCTGCTGTTGGATGTCACCCCTCT 955706 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 ||| |||| |||| ||||| ||||| || ||||| | || | | ||||| || Sbjct 955707 GTCCTTGGGCATTGAGACAGCTGGTGGAGTGATGACAGCTCTCATCAAGCGCAACACCAC 955766 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTC 196601 ||||| || || | || ||| | || ||||| || || || | || | || | Sbjct 955767 CATTCCCACCAAACAAACTCAGACCTTCACCACCTATTCAGACAACCAGAGCA-GCGTCC 955825 Query 196602 ATATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658 | | || ||||| || | |||| ||| || | ||||| ||| | | || || | Sbjct 955826 TTGTCCAGGTATACGAGGGTGAGAGGGCT---ATGACGAAGGACAACAACTTGCTGGGCA 955882 Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718 || || | ||||| || || | || ||| | || || || ||||| | || | Sbjct 955883 AGTTTGACCTAACGGGCATCCCCCCAGCGCCCCGTGGAGTCCCCCAGATCGAGGTCACTT 955942 Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778 | || || || || ||||| || || || |||| || | ||||||| | || || Sbjct 955943 TTGACATCGATGCCAATGGTATCCTGAATGTCAGTGCCGTGGACAAGAGCACGGGTAAGG 956002 Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838 | ||||| || |||||||||||||| || ||| ||||| || ||||| |||| Sbjct 956003 AGAACAAGATCACCATCACCAATGACAAGGGTCGCCTTAGCAAGGATGACATTGACCGTA 956062 Query 196839 TGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 |||| ||||| || || || |||| | ||| || || Sbjct 956063 TGGTGCAAGAAGCAGAGAAATACAAAGCAGAGGATGA 956099 >seq1558 Length=3585338 Score = 187 bits (206), Expect = 3e-42 Identities = 367/541 (68%), Gaps = 4/541 (1%) Strand=Plus/Minus Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||||| | |||||||| ||||| ||||| || |||||||| || |||| | ||||||| Sbjct 3293796 AATGTTCTCATCTTTGACCTCGGAGGTGGCACTTTTGATGTGTCCATTCTGACTATTGAA 3293737 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 | |||||| ||||| || || | ||||| ||||| || || | ||||| ||||| || Sbjct 3293736 GATGGTATCTTCGAGGTGAAATCCACTGCAGGTGACACCCACTTGGGTGGAGAAGACTTT 3293677 Query 195986 GATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATT 196045 || || | | || || || |||||| || || | ||||| || || Sbjct 3293676 GACAACCGCATGGTGAACCACTTCATTGCCGAGTTCAAGCGCAAACACAAGAAGGACATC 3293617 Query 196046 TCTGGAAATCCTAGGGCTC--TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA 196103 || ||| | || || | ||||||| || | || || || || |||||||| || | Sbjct 3293616 AGTGAAAA--CAAGCGCGCAGTTCGTCGCCTCCGCACCGCGTGNGAGCGTGCCAAGCGTA 3293559 Query 196104 CTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACT 196163 |||| ||||||| | || | | |||| ||||| || | | ||| || ||||||| Sbjct 3293558 CTCTGTCTTCTAGCACGCAGGCCAGTATTGAAATTGACTCTCTCTATGAGGGCATTGACT 3293499 Query 196164 TCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGT 196223 |||| ||| | || ||| | || || ||||||||| | || |||| |||| | Sbjct 3293498 TCTACACATCCATCACCAGAGCTCGCTTTGAAGAGCTGAATGCTGACCTGTTCCGCGGCA 3293439 Query 196224 GTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATG 196283 |||| || || || | | || || || || ||| | || ||||| || | ||| Sbjct 3293438 CCCTGGATCCAGTGGAGAAGGCTCTGCGGGATGCCAAGCTTGACAAGTCCCAGATCCATG 3293379 Query 196284 AAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCT 196343 | ||||| || || || || || || ||||| || |||||||| | |||| | Sbjct 3293378 ATATTGTGCTGGTTGGTGGTTCTACTCGTATCCCAAAGATTCAGAAACTGCTGCAGGATT 3293319 Query 196344 TCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTG 196403 |||||||| ||||| | ||||| | ||||| || ||||| || || |||||||||| Sbjct 3293318 TCTTCAATGGCAAAGAGCTGAACAAGAGCATCAATCCTGATGAGGCTGTGGCTTATGGTG 3293259 Query 196404 C 196404 | Sbjct 3293258 C 3293258 Score = 116 bits (128), Expect = 5e-21 Identities = 113/143 (79%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || |||||||| || || || |||| || || || || ||||| ||||| || | Sbjct 3294058 ATGCTGTAGTGACTGTCCCAGCCTATTTCAACGACTCTCAGCGTCAGGCTACAAAAGATG 3293999 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || |||| | ||||||||||||| |||||||| |||||| Sbjct 3293998 CTGGAACCATTGCAGGGCTCAA-TGTCCTGCGAATTATCAATGAGCCAACAGCTGCTGCA 3293940 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || ||||||||||||||||| Sbjct 3293939 ATAGCCTATGGTCTGGACAAGAA 3293917 >seq2507 Length=1053364 Score = 102 bits (112), Expect = 1e-16 Identities = 127/174 (73%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATT 195873 |||||| ||||| ||||||||||| ||||||||| ||| ||| || ||| | | Sbjct 925947 AACAGCTGCTGCCATTGCTTATGGATTGGACAAGAGAGAGGG---AGANAAGAATATCCT 926003 Query 195874 GATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTAT 195933 | ||||| | |||||||| || ||||||||||| || |||| || || ||| | Sbjct 926004 CGTGTTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACCATCGATAATGGAGT 926063 Query 195934 ATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| ||||||| |||||| ||||| || ||||| ||||| || || Sbjct 926064 CTTTGAAGTCGTGGCTACTAATGGTGACACTCACCTGGGTGGGGAAGACTTTGA 926117 >seq2936 Length=485473 Score = 86.0 bits (94), Expect = 8e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||||||||| || || ||||| ||||| || |||||||| || ||||| ||||||||||| Sbjct 421836 AGGCATTCCTCCTGACCAGCAGCGACTGATCTTTGCTGGAAAGCAGCTCGAAGATGGACG 421895 Query 172023 TACCCTCGCTGATTACAACGTTCAAAA 172049 || || |||| |||||| | ||||| Sbjct 421896 CACGCTGTCTGACTACAACATCCAAAA 421922 >seq155 Length=184411 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 78638 CAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAAC 78697 || || ||||||||||| || || ||||| ||||||||| ||| ||||| ||| ||| Sbjct 6888 CAGACTGAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAACAGGAAGAGCAAC 6947 Query 78698 CAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACAC 78756 || ||||||| || ||||||| || ||||| || |||||||| |||| || || Sbjct 6948 CAGCAGAACCTGGGCACCATCAAATGCAGCAACCTGTGTACAGAAATCGTGGAGTATAC 7006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657835822359040