Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq155 86.0 7e-12 >seq155 Length=184411 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104901 TCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAA 104960 || |||| || || ||||| || ||||| |||||||| ||||||||| |||| ||| | Sbjct 6880 TCGAGTCACAGACTGAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAACAGGA 6939 Query 104961 AGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGG 105020 |||| || || |||| |||| ||||| | ||| || |||||||||||| ||| Sbjct 6940 AGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTGTGTACAGAAATCGTGG 6999 Query 105021 AATTTACAGACAAAGATGAG 105040 | | ||| |||||| ||| Sbjct 7000 AGTATACCAGCAAAGAGGAG 7019 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 105497 GGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTG 105556 ||| || | |||||||| ||| | ||||||||||||| || ||||| || || ||| || Sbjct 12659 GGTGTTAGGAACAGTCTTCTCCTTTCTCCAATGCCAACTGCTTCCACTGCTCAGATCCTG 12718 Query 105557 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCG 105616 || || || |||| | | || |||||||| | |||||||| | ||| |||| | Sbjct 12719 GGCAACAACGAATCCATCGAGCCCTACACCAGTAACATCTACACACGGAGAGTCCTCTCA 12778 Query 105617 GGAGAGTT 105624 |||||||| Sbjct 12779 GGAGAGTT 12786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583237236263680