Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq155 82.4 9e-11 >seq155 Length=184411 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 80575 GGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC--GACTCCA 80632 ||||| ||| || | || || || || |||| | |||||| |||||||| | || | Sbjct 10376 GGAGAACCCTCGTATGTTTCATAGGGTCCCTGCTCCTTGGCAAGCTCACAGCTGGCTTCC 10317 Query 80633 TAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGT 80692 ||| ||| | ||| ||| ||| |||| || ||||| | | |||| || Sbjct 10316 AAAGCACCG--TAATAGATGGTCTCGAAGATCTGCTGGTTCAGGCGCTGGGCCTCGGGAC 10259 Query 80693 CGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGA 80752 || || | || | ||||| ||||| | || ||||||||||| || |||||| ||| Sbjct 10258 TCTCAAAGGGGAACCTCATCAGGATGAAGGCATCTGCCAGGCCCTGCACCCCGATGCCGA 10199 Query 80753 TCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCT 80785 | || ||||||||| |||| || ||||| |||| Sbjct 10198 TGGGACGGTGGCGCCTGTTGGAGCGCTCCGCCT 10166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570287359459840