Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq2003 87.8 7e-13 >seq2003 Length=1208679 Score = 87.8 bits (96), Expect = 7e-13 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 52110 ATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCG 52169 ||||| ||| |||| |||||| | || | ||| |||||||| ||| ||| | | || Sbjct 411041 ATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTTGATGGTGAATTGTCA 410982 Query 52170 TGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGC 52229 ||||| | |||||| |||||| || ||| | || || || || || ||||||||| Sbjct 410981 TGCCAGCTCTATCAGAGGTCTGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCAGC 410922 Query 52230 TATTCCTTGCTGACGCATCTGATTGC 52255 ||||| ||||| || || ||||||| Sbjct 410921 TATTCATTGCTTACTTATATGATTGC 410896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190088704115520