Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq178466 89.7 1e-12 seq151639 89.7 1e-12 seq97276 89.7 1e-12 seq31183 89.7 1e-12 seq46282 86.0 1e-11 >seq178466 Length=3754 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1432 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1373 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1372 CCCACGTTGGGC 1361 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||| |||||||||| ||||| ||||||| |||||||||||||||| Sbjct 73 GCCCGGCTAGCTCAATCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13 CCCACGTTGGGC 2 >seq151639 Length=352 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 73 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 13 CCCACGTTGGGC 2 >seq97276 Length=801 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 729 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 788 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 789 CCCACGTTGGGC 800 >seq31183 Length=6202 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 330 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 389 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 390 CCCACGTTGGGC 401 >seq46282 Length=8445 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| |||||||| |||||||||| ||||| ||||||| |||||||||||||||| Sbjct 7116 GCCCGGCTAGCTCAATCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7057 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 7056 CCCACGTTGGGC 7045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1055344085677620