Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq102244 163 3e-35 seq181375 100 3e-16 >seq102244 Length=1128 Score = 163 bits (180), Expect = 3e-35 Identities = 201/275 (73%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 776 GGGCACGCCGTCCGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 835 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 |||||| |||||| ||| |||||||| | ||| |||| | ||| ||| || Sbjct 836 CACTGGGGACCAGATGATGTACTGGGGGTTGGTCATCAGCGAGGAGGGGTCATCGTGCGG 895 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 || || |||||| ||||||| |||||| || || || | | ||||| ||||| Sbjct 896 GAAGGGTAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTTCCCCCCGTTAACCTC 955 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | || ||||| |||| | | || ||||||||||||||||||| || Sbjct 956 GCACTTCTCGAACATGATGAAGTTGGGCTTGTACCCCTTCCCAGGACGGACGTGCTCTAG 1015 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || || |||||| | ||| || ||||||| Sbjct 1016 CGACAACAGGATCTCCTCGTTCGTCGCATTTTCCT 1050 >seq181375 Length=3064 Score = 100 bits (110), Expect = 3e-16 Identities = 116/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || ||||| ||||||||||| || ||||| || ||||| ||||||| ||| | || Sbjct 1685 TTACCTGGAAGCCGAACTGGTTGCAGGGGAAGCCCAGCACCACCAGCCGCCGGGGG--TA 1742 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||| |||| ||| | ||| ||||| ||||| | |||| |||||||| || | Sbjct 1743 GCGGGC-CTGGAGCTGGTTGAGCTGGGTGTAATCCCGCAGCGTGGAGCCTCAGAGCGATG 1801 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 | |||||||||||||| | || |||||||| || Sbjct 1802 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAA 1835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607404375178960