Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq42193 109 4e-19 >seq42193 Length=10335 Score = 109 bits (120), Expect = 4e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| |||||| |||| | | |||||||| ||||| || |||||||| ||| Sbjct 4426 GTGACATGGGCAATCATATAAGTAAGCAATGAATAGCTGGCAATATTGAAAGGCACTCCT 4367 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||||| ||| || || | | |||||| ||||| Sbjct 4366 AGTCCCATATCTCCAGACCTCTGATATAGCTGGCATGACAATTCACCATCAAGAACATAG 4307 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 4306 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 4272 Score = 89.7 bits (98), Expect = 4e-13 Identities = 109/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 871 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 812 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || || |||| ||||||||||| Sbjct 811 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGACCCATGAGCATCCCAAAT 756 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | |||||| ||| | ||||||||| Sbjct 755 CTTCACACCTTTTGCAGAGAGCTCTTTG 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346010673197180