Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq144538 104 2e-17 seq116889 96.9 2e-15 >seq144538 Length=901 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||||||||| ||||| || | || |||| ||||||||| || || Sbjct 4 TTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 63 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || |||| |||||||||| || | || |||||||| ||||| ||| | | Sbjct 64 GATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTT 123 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||| | | || || |||| |||||||| ||||| ||||| || ||||| Sbjct 124 CTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 183 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 184 GAAGATCTGCAT 195 >seq116889 Length=707 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||| || || | || ||| ||||| ||||| ||||| ||||| || |||| Sbjct 621 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTGCGTCCGTC 562 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 |||| ||||||||| ||||| || |||| ||||||||| || | || || ||||| Sbjct 561 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTC 502 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||| | || | || | || | | || || || | |||||||| Sbjct 501 CTGGATTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGT 442 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || ||||||||||||||||| Sbjct 441 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322351550853440