Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq125744 435 2e-117 seq63428 87.8 1e-12 seq69352 84.2 2e-11 >seq125744 Length=1335 Score = 435 bits (482), Expect = 2e-117 Identities = 703/1002 (70%), Gaps = 14/1002 (1%) Strand=Plus/Plus Query 107628 TACCTCAACATAACCAGAGACTGTGAGCGC-TTCAAGGCCCAAAGGAAGTTCATACAGTT 107686 ||||| ||||| |||| ||||| ||||| ||||||| || ||||||| |||| Sbjct 167 TACCTGAACATGACCAAGGACTGC-AGCGCCTTCAAGGAGAGCCGGCGGTTCATAGAGTT 225 Query 107687 CCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAA 107746 ||| ||||| | |||||| ||| |||||||| |||||||| ||||| ||||| | || Sbjct 226 CCCGCTGAGCCAGGAAGAGGAAGAGTTCCCCATCGCCTACTCCATGGTCATCCATAACAA 285 Query 107747 GATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGT 107806 ||||| | || || ||||| ||||| || | |||||||| ||||| | ||||| || Sbjct 286 AATTGAGATGTTCGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAATGTCTACTGCGT 345 Query 107807 CCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTG 107866 |||| ||||| |||||||||| | ||| | || || || |||||| | |||| Sbjct 346 CCACATGGATAACAAGTCCCCAGCCGCCTTCCAGGAAGCCGTGCGGGCCATCGTAGCCTG 405 Query 107867 CTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAG 107926 ||||||||| ||||| |||| || | ||| ||||| ||||||||||||||| | Sbjct 406 CTTCCCCAACGTCTTTGTGGCGAGCCACCTGGAAAACGTGGTCTATGCCTCCTGGTCCCG 465 Query 107927 AGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTA 107986 |||| || ||||| ||||| ||| | ||| || | ||||| | | || ||| | || Sbjct 466 GCTGCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGTCCCATTCCCTGGCACTA 525 Query 107987 CTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGC 108046 | | || || || ||||| || || |||||||| ||||| || |||||||| |||| || Sbjct 526 CGTCCTCAACACCTGCGGCACTGATTTCCCCATCAAGACGAACGCCGAGATTGTCCGTGC 585 Query 108047 CCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaa 108106 ||| ||| || || |||| |||||| |||||||| ||| || || | ||| | Sbjct 586 CCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCGGAGAAGCCGTCAGCACTCAAGCA 645 Query 108107 aaaTCGCTGGAAATACCGCTATGAGGTGACAGACA---CACTGTACC---CTACCAGCAA 108160 | |||||| |||||| | | |||||| ||| || || | | || | ||| ||| Sbjct 646 GCAGCGCTGGCAATACCACCACGAGGTG-CAG-CAGGTCA-TCTTCCGGACAGCCACCAA 702 Query 108161 GATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGC 108220 || | ||||||| | || | ||||||||||| || || || || | ||| Sbjct 703 GAAACTGCCGCCTCCCC---ACAACTACCCCATGTTCACTGGTAACGCATACGTCGTGAT 759 Query 108221 CTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATG 108280 | | || ||||| || || || |||| || |||| | | || | | || || Sbjct 760 CACCCGTGCCTTCGTGCAGCACATCTTCGAGGACCCCGCAGCGCAGCAGTTCCTCGAGTG 819 Query 108281 GGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTG 108340 || ||| |||||||| ||||| ||||| ||| |||||||||| || | |||| || | Sbjct 820 GGCCAAGGACACCTACAGCCCTGACGAGCACGTCTGGGCCACGCTCAACCGTGTGCCTGG 879 Query 108341 GATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGC 108400 |||| ||| | | || || ||||| || |||| ||||||| ||| | | Sbjct 880 TGTGCCCGGCGCCATGCCCCCGAACGACAAGTTCCAGCTCTCGGACATGAACGCCCTGCC 939 Query 108401 CAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACC 108460 | | || ||||||||| |||||| ||||| || ||||| ||| |||||||| |||| Sbjct 940 CCGTCTGGTCAAGTGGGAGTACCTGGAGGGGGACACCAGCAAGGGCGCGCCTTACCCACC 999 Query 108461 CTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGAT 108520 |||| | || |||| | | ||| |||| || ||||| | || ||| || |||||| Sbjct 1000 CTGCACCGGCCAGCATCAGCGCGCCGTCTGTATCTACGGCGTGGGCGACGTGCCCTGGAT 1059 Query 108521 TCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCT 108580 |||||| | || ||||||||||| |||||||| ||||| |||||| || ||| | Sbjct 1060 GCTCCAGCAGCACCACCTCTTGGCCAACAAGTTCGACCCCTTGGTGGACGACGCCGTTAT 1119 Query 108581 GCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATGG 108622 || ||| | || ||| |||| || || | |||| |||| || Sbjct 1120 CCAATGCCTGGAGGAGCACCTGCGCCACAGGGCCCTCTACGG 1161 >seq63428 Length=24199 Score = 87.8 bits (96), Expect = 1e-12 Identities = 227/341 (67%), Gaps = 10/341 (3%) Strand=Plus/Minus Query 107700 GAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTT 107759 |||||| | |||||||||||||||| ||| | || || || |||| | |||| Sbjct 1488 GAAGAGGCCGCCTTCCCCATTGCCTACGTTATGACCCTGCACAAGGAGTTTGAGACCTTT 1429 Query 107760 GAACGGCTGCTGCGAGCCGTGTA--TGCCCCTCAGAACATATACTGTGTCCACGTGGATG 107817 || ||||| | | || ||||| |||||| ||||| | ||||| |||||||||||| Sbjct 1428 GAGCGGCTCTTCAGGGCAGTGTACATGCCCC--AGAACGTCTACTGCATCCACGTGGATG 1371 Query 107818 TGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATG 107877 ||| | || | |||| | ||| || || | | | |||||||||||| | Sbjct 1370 CCAAGGCACCGGCCCGTTTCCATCGGGCAGTGCAGCGCCTGCTGGGCTGCTTCCCCAACG 1311 Query 107878 TCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTG 107937 |||| | ||| | || | |||||| |||| | | ||| | ||| |||| Sbjct 1310 CCTTCCTCGCCTCCCGGACGGAGCGGGTGGTCTATGGCGGCATCTCCCGCCTGCGGGCTG 1251 Query 107938 ACCTGAACTGTATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGAA 107995 |||| |||| ||| |||| |||| || | | ||||| ||| ||| | || || Sbjct 1250 ACCTCCACTGCATGAGAGACCTGCTGGCCTCGG--CCGTGCCCTGGCGCTACCTGCTCAA 1193 Query 107996 TACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGA 108036 || ||||| ||||||||| | |||||||| |||||| Sbjct 1192 CACCTGCGGCCAGGACTTCCCCTTGAAGACCAA--CCGAGA 1154 >seq69352 Length=7906 Score = 84.2 bits (92), Expect = 2e-11 Identities = 226/341 (66%), Gaps = 10/341 (3%) Strand=Plus/Plus Query 107700 GAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTT 107759 |||||| | |||||||||||||||| ||| | || || || |||| | |||| Sbjct 26 GAAGAGGCCGCCTTCCCCATTGCCTACGTTATGACCCTGCACAAGGAGTTTGAGACCTTT 85 Query 107760 GAACGGCTGCTGCGAGCCGTGT--ATGCCCCTCAGAACATATACTGTGTCCACGTGGATG 107817 || ||||| | | || |||| |||||| |||||| | ||||| |||||||||||| Sbjct 86 GAGCGGCTCTTCAGGGCAGTGTACATGCCC--CAGAACGTCTACTGCATCCACGTGGATG 143 Query 107818 TGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATG 107877 ||| | || | |||| | ||| || || | | | |||||||||||| | Sbjct 144 CCAAGGCACCGGCCCGTTTCCATCGGGCAGTGCAGCGCCTGCTGGGCTGCTTCCCCAACG 203 Query 107878 TCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTG 107937 |||| | ||| | || |||||| |||| | | ||| | ||| |||| Sbjct 204 CCTTCCTCGCCTCCCGGACGGAGTGGGTGGTCTATGGCGGCATCTCCCGCCTGCGGGCTG 263 Query 107938 ACCTGAACTGTATGGAAGACTTGCT--CCAGAGCTCAGTGCCATGGAAGTACTTACTGAA 107995 |||| |||| ||| |||| |||| || | | ||||| ||| ||| | || || Sbjct 264 ACCTCCACTGCATGAGAGACCTGCTGGCCTCGG--CCGTGCCCTGGCGCTACCTGCTCAA 321 Query 107996 TACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGA 108036 || ||||| ||||||||| | |||||||| |||||| Sbjct 322 CACCTGCGGCCAGGACTTCCCCTTGAAGACCAA--CCGAGA 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347492162099676