Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq116889 109 5e-19 seq144538 96.9 3e-15 >seq116889 Length=707 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | ||||| || | || | || || || || || |||||||| || Sbjct 636 GCCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGA 577 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| |||||| ||||| || ||||| ||||||| | ||||| || ||||| Sbjct 576 CAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGG 517 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||||||| || | | || | ||||| ||||||| || Sbjct 516 AATGCCTTCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCAAC 457 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | |||||||| |||| || || || || || ||||| Sbjct 456 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 409 >seq144538 Length=901 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 139571 GACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGC 139629 || || || || ||||| || || || |||| || | ||||| ||||| || ||||| Sbjct 2 GATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCCAGC 60 Query 139630 ATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAG 139689 | ||||||| | ||||| ||||| || |||||||| ||||| ||| || || | Sbjct 61 AAAGATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCAC 120 Query 139690 CTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTT 139749 | || | |||||| ||||||||||||| | ||| | |||||||| || | || || Sbjct 121 GTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTT 180 Query 139750 TACGAATATTTGCAT 139764 ||||| || ||||| Sbjct 181 CACGAAGATCTGCAT 195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494929414820800