Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq116889 93.3 4e-14 seq169721 86.0 5e-12 >seq116889 Length=707 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | ||||| || || | ||||| || | || ||| | || || ||| | Sbjct 405 CAACATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCC 464 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || |||||||| ||| | || || ||| || |||||||||||||| ||||| || Sbjct 465 CAGTGACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCTCCTGA 524 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || ||||| ||||| | || |||||||| || ||||| | | | | | || || Sbjct 525 CCAGCAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTA 584 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||| || || ||||| || | ||| | ||| Sbjct 585 TAACATCCAGAAGGAATCCACCCTCCATCTTGTG 618 >seq169721 Length=3200 Score = 86.0 bits (94), Expect = 5e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 104593 TATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATA 104652 |||||||||||||| || ||||| ||||| ||||||||||||||||| || || | ||| Sbjct 1185 TATTCGCCTACTCGCTTCTCAAAGAAATTGGTCTTGCCCTCCAGAGAGATGTTTTCCATG 1244 Query 104653 AATTCGAAAGGATTC 104667 || || ||||||||| Sbjct 1245 AAGTCAAAAGGATTC 1259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428977244600970