Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq38221 95.1 2e-14 seq97276 91.5 3e-13 seq31183 91.5 3e-13 seq178466 89.7 1e-12 seq151639 89.7 1e-12 seq46282 87.8 4e-12 >seq38221 Length=6789 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 3242 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 3301 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 3302 TCCCGGCAGAGA 3313 >seq97276 Length=801 Score = 91.5 bits (100), Expect = 3e-13 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 142492 GGTGGTGAGATAG-CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGT 142550 |||| ||| || | ||||| |||||||||||||||||| ||||||||||||| ||| Sbjct 716 GGTGCTGATATGGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGT 775 Query 142551 CGTGGGTTCGAGCCCCACATCGGGC 142575 |||||||||||||||||| | |||| Sbjct 776 CGTGGGTTCGAGCCCCACGTTGGGC 800 >seq31183 Length=6202 Score = 91.5 bits (100), Expect = 3e-13 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 142492 GGTGGTGAGATAG-CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGT 142550 |||| ||| || | ||||| |||||||||||||||||| ||||||||||||| ||| Sbjct 317 GGTGCTGATATGGGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGT 376 Query 142551 CGTGGGTTCGAGCCCCACATCGGGC 142575 |||||||||||||||||| | |||| Sbjct 377 CGTGGGTTCGAGCCCCACGTTGGGC 401 >seq178466 Length=3754 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1432 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1373 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1372 CCCACGTTGGGC 1361 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||| Sbjct 74 AGCCCGGCTAGCTCAATCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 15 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 14 CCCCACGTTGGGC 2 >seq151639 Length=352 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 73 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 13 CCCACGTTGGGC 2 >seq46282 Length=8445 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||| Sbjct 7117 AGCCCGGCTAGCTCAATCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 7058 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 7057 CCCCACGTTGGGC 7045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025427186301134