Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq144538 161 2e-34 seq116889 141 2e-28 seq45594 118 2e-21 >seq144538 Length=901 Score = 161 bits (178), Expect = 2e-34 Identities = 155/196 (79%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 68267 GGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGC 68326 ||| || || |||||||| || || || || || | |||||||| | |||||| || || Sbjct 1 GGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGC 60 Query 68327 GAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGAC 68386 || || || || || |||||||||||||||||||||||||| || ||||| ||||| || Sbjct 61 AAAGATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCAC 120 Query 68387 GGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445 | ||| |||||||| ||| | || || |||| ||||||||| || || ||||| |||| Sbjct 121 GTTCTCAATGGTGTC-GCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCT 179 Query 68446 TGACGAATATCTGCAT 68461 | ||||| |||||||| Sbjct 180 TCACGAAGATCTGCAT 195 >seq116889 Length=707 Score = 141 bits (156), Expect = 2e-28 Identities = 157/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| || || ||||||||||| || || || || | || ||||| | Sbjct 616 CAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTGCGTCCGTCTTCCA 557 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||| || ||||| || || || || ||||| || ||||||||||| ||||| || | Sbjct 556 GCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGA 497 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | |||||||| || ||| |||||||| | || || || | ||||||||| || | Sbjct 496 TTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 437 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| || || |||||||| Sbjct 436 CAGTCAGGGTCTTCACAAAGATCTGCAT 409 >seq45594 Length=40842 Score = 118 bits (130), Expect = 2e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||||| || | || || ||||| || || |||||||| || || || || || | Sbjct 40670 AGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGT 40729 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| || ||||| || || || || ||||| || |||||||||||| Sbjct 40730 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCC 40789 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||| || ||||| ||||| ||| || |||||||| Sbjct 40790 TTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTC 40827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919514488287280