Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq42193 102 7e-17 >seq42193 Length=10335 Score = 102 bits (112), Expect = 7e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| |||| ||||||||| | | |||||||||||||| || ||||| Sbjct 4432 AGCCCTGTGACATGGGCAATCATATAAGTAAGCAATGAATAGCTGGCAATATTGAAAGGC 4373 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 ||||| | ||||| ||||| ||||||||||| ||||| || || | ||||| ||| Sbjct 4372 ACTCCTAGTCCCATATCTCCAGACCTCTGATATAGCTGGCATGACAATTCACCATCAAGA 4313 Query 20357 ACATAAAATTGACA 20370 ||||| || || || Sbjct 4312 ACATAGAACTGGCA 4299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592 || ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||| Sbjct 865 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 806 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | || || |||||||||| | || |||| ||||| ||||| || || Sbjct 805 C-TGAAACCCTGCTTATCCAGGAACTCACGTGACCCATGAGCATCCCAAATCTTCACACC 747 Query 20653 TGTTCTTGAAAGCTC 20667 | || || ||||| Sbjct 746 TTTTGCAGAGAGCTC 732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440363303166160