Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq88221 84.2 2e-11 seq116889 82.4 7e-11 >seq88221 Length=1045 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 123588 ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAAC 123647 || ||||| |||| || ||||| || || |||||||||||||||||| |||||||| Sbjct 853 ATCATCGAGTCACAGACTGAGACCGGCACACCCTACATGCTCTACAAAGACTCCTGCAAC 794 Query 123648 AGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||||| | ||| ||| ||| |||| || || ||||| || || || || | ||||| Sbjct 793 AGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAATGCAGCAACCTGTGTACAGAAAT 735 >seq116889 Length=707 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | ||| | || ||| ||||| || || |||||||| ||||| ||||| || Sbjct 638 ATGCCACCTCTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCA 579 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || |||| || || || ||| | |||| | |||||||| || Sbjct 578 GACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGA 519 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| || || |||||| || | || | |||||| | ||| Sbjct 518 GGAATGCCTTCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCA 459 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | || ||||| || || || || ||||| || ||||| Sbjct 458 ACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450969389581040