Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq73174 111 6e-19 seq49277 111 6e-19 seq56164 93.3 2e-13 >seq73174 Length=5264 Score = 111 bits (122), Expect = 6e-19 Identities = 462/720 (64%), Gaps = 17/720 (2%) Strand=Plus/Minus Query 450896 ATGTCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGT 450955 ||||||| |||| ||||| || || || || || ||||| | || || || ||| Sbjct 5195 ATGTCTGGCAAAGGGCCGGCAATCGGCATCGACCTGGGCACCACGTACTCTTGCGTGGGT 5136 Query 450956 GTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCT 451015 || | ||| |||| || || || || || || ||||||||||| || || || || Sbjct 5135 GTCTTCCAGCATGGCAAAGTGGAGATCATTGCCAATGACCAAGGGAACCGCACCACACC- 5077 Query 451016 TCATGGGTAAGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAA 451070 || | || || || || ||| |||| | || | || | || || || | | | Sbjct 5076 -CA--GCTATGTGGCCTTCACTGATACAGAGCGCCTCATCGGTGATGCAGCCAAGAACCA 5020 Query 451071 TGGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGT 451130 ||| | || | | ||||| | | ||||||||| ||| | || ||||| | || Sbjct 5019 -GGTGGCTATGAACCCTACCAACACCATCTTTGATGCTAAGCGTCTCATCGGCCGCAAGT 4961 Query 451131 ATGATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAA 451190 ||||||| || || || || | || || | | ||| || ||| | | Sbjct 4960 ATGATGACCCCACAGTGCAGTCCGATATGAAGCACTGGCCCTTCCGTGTGGTGAATGACA 4901 Query 451191 AAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAG 451250 || |||||| | | ||||| | || || || || | || ||||| || || | Sbjct 4900 GTGGCAAGCCCAAGGTACAAGTGGAGTACAAGGGGGAGATGAAGACTTTCTTCCCAGAGG 4841 Query 451251 AAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC 451310 | || |||||||| || || || ||||| || | || || ||| | || | | Sbjct 4840 AGATCAGCTCTATGGTCCTAACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGG-CGC 4782 Query 451311 CAGTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 | | | || ||| || ||||| || || ||||| |||||||| | || || || || Sbjct 4781 AAAGTGCAGAATGCCGTCATTACAGTGCCTGCTTACTTCAATGACTCCCAGCGTCAGGCC 4722 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || |||||||| || || |||| | ||||| | || ||||| |||||||| ||| Sbjct 4721 ACCAAAGATGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAATGAACCCACA 4662 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA----AACAGAAGaaaaaaaTAT 451485 ||||||||| |||| ||||| || ||| || || | | | | || || ||| | Sbjct 4661 GCAGCTGCTATAGCCTATGG-CTTGGACAAGAAAGGTACTCGAGCTGGTGAGAAGAATGT 4603 Query 451486 TTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG 451545 | | ||||| || || || || ||| ||| || | ||| | ||||| ||||| Sbjct 4602 GCTCATCTTTGACTTGGGAGGGGGTACTTTCGATGTGTCCATCCTTACCATTGAGGATGG 4543 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||||| || ||| | || |||||| || ||||| || || || || |||| || Sbjct 4542 AATCTTTGAGGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAA 4483 >seq49277 Length=55671 Score = 111 bits (122), Expect = 6e-19 Identities = 462/720 (64%), Gaps = 17/720 (2%) Strand=Plus/Plus Query 450896 ATGTCTGTCAAAAAAGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGT 450955 ||||||| |||| ||||| || || || || || ||||| | || || || ||| Sbjct 51698 ATGTCTGGCAAAGGGCCGGCAATCGGCATCGACCTGGGCACCACGTACTCTTGCGTGGGT 51757 Query 450956 GTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCT 451015 || | ||| |||| || || || || || || ||||||||||| || || || || Sbjct 51758 GTCTTCCAGCATGGCAAAGTGGAGATCATTGCCAATGACCAAGGGAACCGCACCACACC- 51816 Query 451016 TCATGGGTAAGT----TTTACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAA 451070 || | || || || || ||| |||| | || | || | || || || | | | Sbjct 51817 -CA--GCTATGTGGCCTTCACTGATACAGAGCGCCTCATCGGTGATGCAGCCAAGAACCA 51873 Query 451071 TGGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGT 451130 ||| | || | | ||||| | | ||||||||| ||| | || ||||| | || Sbjct 51874 -GGTGGCTATGAACCCTACCAACACCATCTTTGATGCTAAGCGTCTCATCGGCCGCAAGT 51932 Query 451131 ATGATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAA 451190 ||||||| || || || || | || || | | ||| || ||| | | Sbjct 51933 ATGATGACCCCACAGTGCAGTCCGATATGAAGCACTGGCCCTTCCGTGTGGTGAATGACA 51992 Query 451191 AAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAG 451250 || |||||| | | ||||| | || || || || | || ||||| || || | Sbjct 51993 GTGGCAAGCCCAAGGTACAAGTGGAGTACAAGGGGGAGATGAAGACTTTCTTCCCAGAGG 52052 Query 451251 AAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTC 451310 | || |||||||| || || || ||||| || | || || ||| | || | | Sbjct 52053 AGATCAGCTCTATGGTCCTAACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGG-CGC 52111 Query 451311 CAGTTACTGA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 | | | || ||| || ||||| || || ||||| |||||||| | || || || || Sbjct 52112 AAAGTGCAGAATGCCGTCATTACAGTGCCTGCTTACTTCAATGACTCCCAGCGTCAGGCC 52171 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 || |||||||| || || |||| | ||||| | || ||||| |||||||| ||| Sbjct 52172 ACCAAAGATGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAATGAACCCACA 52231 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA----AACAGAAGaaaaaaaTAT 451485 ||||||||| |||| ||||| || ||| || || | | | | || || ||| | Sbjct 52232 GCAGCTGCTATAGCCTATGG-CTTGGACAAGAAAGGTACTCGAGCTGGTGAGAAGAATGT 52290 Query 451486 TTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG 451545 | | ||||| || || || || ||| ||| || | ||| | ||||| ||||| Sbjct 52291 GCTCATCTTTGACTTGGGAGGGGGTACTTTCGATGTGTCCATCCTTACCATTGAGGATGG 52350 Query 451546 GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||||| || ||| | || |||||| || ||||| || || || || |||| || Sbjct 52351 AATCTTTGAGGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGGGAGGACTTTGACAA 52410 >seq56164 Length=10698 Score = 93.3 bits (102), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 726 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 785 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| || || || ||||| ||||||||||| Sbjct 786 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACAGCAGA 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1971086615925192