Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq106051 122 2e-22 seq88221 114 2e-20 seq169721 95.1 2e-14 seq91951 91.5 3e-13 seq27467 91.5 3e-13 seq20872 87.8 3e-12 >seq106051 Length=505 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 ||||||| ||| ||||| ||||| ||||| ||||| || | | ||||| || ||| Sbjct 280 AGGACCTTCTGCTTGAGCTGGGCGACCTGCTCCCGGAGCAGGCTGGCGGTGGAGGCCAGC 221 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| ||||||||||| || | ||| || ||||| Sbjct 220 TCCGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGGGAGATCCGCTCCAGC 161 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| || || | ||| |||| || | ||| |||||||||||| Sbjct 160 TTCCTCTTGCGGCACTTGGAAGCGGCGATGCGATTCCTCAGCCGCTTCCGTTCCGCCTTG 101 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 || || ||||| ||||||||||| || || Sbjct 100 ATCCGCTCCTGCGTGTCCATGTCGATGGGGGA 69 >seq88221 Length=1045 Score = 114 bits (126), Expect = 2e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 || ||||||| ||| || || ||||||||||||||| |||||||||||||||||| ||| Sbjct 723 GTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 782 Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647 || ||| |||| || || ||||||||||||||||| | |||||||| ||| Sbjct 783 TTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCAGTCTGT 842 Query 213648 GACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCC 213690 ||| | | || | |||||| | | |||||| ||||||| Sbjct 843 GACTCGATGATGGAGTACCAGAGCTGCTGGGCCTTCACCACCC 885 >seq169721 Length=3200 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 48164 CTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAA 48223 |||||||| |||| || || ||| |||||||| | || || | ||| ||||| ||| Sbjct 2412 CTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTTTTCAGCCAAAAA 2471 Query 48224 ATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGC 48273 |||| || |||||||||||||||||||| || |||||||| ||||| || Sbjct 2472 ATTGATGCAAAAGAGCCAGAGAAGAAGATTCCTTCCACTGCTGCGAAAGC 2521 >seq91951 Length=1137 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || |||||| || |||||||| || |||| ||| | ||| |||||||||||||| Sbjct 511 TACCTGGAACTCTCCTGAGAGGACTCTCCGTGTGTAGATGTTACTGGTGTAGGGCTCGAT 452 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | |||||||| ||||| ||||| |||||| || || ||||| |||| | || || Sbjct 451 GGATTCGTTGTTGCCCAGGATCTGAGCAGTGGAAGCAGTTGGCATTGGAGAAAGGAGAAG 392 Query 213035 ACTGTTCCTCACTCC 213049 ||||||||| || || Sbjct 391 ACTGTTCCTAACACC 377 >seq27467 Length=3426 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||||||| || || |||| ||| | ||||| || ||||||||||| ||||| Sbjct 2367 CCTTTGCTGACAGGAGAACCCTCGTATGTTTCATAGGGTCCCTGCTCCTTGGCAAGCTCA 2308 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| || | || ||| |||| |||||||| || || |||| | ||| | || | Sbjct 2307 CAGCTGGCTTCCAAAGCACCGTAATAGATGGTCTCGAAGATCTGCTGGTTCAAGCGCTGG 2248 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACC 213320 ||||| || | ||||| | | |||| | ||| |||| ||||| ||||| ||| Sbjct 2247 GCCTCGGGACTCTCAAAGGGGAACCTCATCAGGATGAAGGCATCTGCCAGGCCCTGCACC 2188 Query 213321 CCGATGCCGATGGGTCTGTG 213340 |||||||||||||| | ||| Sbjct 2187 CCGATGCCGATGGGACGGTG 2168 >seq20872 Length=3282 Score = 87.8 bits (96), Expect = 3e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| |||||||| ||||| || ||||| | | ||||| || ||||| | | |||| Sbjct 2158 GTTGAGGGACTGGCTCTGATCAATGAAAGCTCCTCTGTCTGCTGCCATCTTGAGGATAGT 2217 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | ||||||||| |||||||||||||||| ||| | || ||||| || || | | || Sbjct 2218 TTTCTGGGAGATCTCCCACACGGTCTTGTAGAGCTGCTTCAGGTCATCCGGAATCTCAGG 2277 Query 212816 GATGTTCT 212823 |||||||| Sbjct 2278 GATGTTCT 2285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929402221468160