Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq167228 131 2e-24 seq108764 125 9e-23 seq49342 125 9e-23 seq180611 122 1e-21 seq29365 120 4e-21 seq167083 111 2e-18 seq36262 111 2e-18 seq20774 107 2e-17 seq88221 98.7 1e-14 seq43354 91.5 2e-12 seq36587 89.7 6e-12 >seq167228 Length=2796 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | || |||||||| ||||||||||| || | || Sbjct 1955 GCTTGGCCAGCTCACCCGGCAGCAGAAGCCGCACGGCCGTCTGGATCTCCCGAGAAGTGA 2014 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| ||||||||| ||| || ||| ||||||| |||| | Sbjct 2015 TGGTGGAGCGTTTGTTGTAGTGCGCCAAGCGGGAAGCTTCGCCAGCGATGCGCTCGAAGA 2074 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| || |||||| |||||||| Sbjct 2075 TGTCGTTGACGAAAGAGTTCATGATACCCATGGCCTTAGAAGAAATGCCCGTGTCGGGGT 2134 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2135 GCACCTGCTTCAGCACCTTGTA 2156 >seq108764 Length=893 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| | |||||| ||||||||||| | | | || Sbjct 264 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCTCACGGCCGTCTGGATCTCCCTGGAGGTGA 205 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | ||||||| || || || | ||||||| |||| | Sbjct 204 TAGTGGAGCGCTTATTGTAATGCGCCAAGCGCGACGCTTCCCCGGCGATGCGCTCGAAGA 145 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||||||| |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 144 TGTCGTTGACAAAGGAGTTCATGATGCCCATGGCCTTAGAAGAGATGCCGGTGTCCGGGT 85 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 84 GGACCTGCTTCAGCACCTTGTA 63 >seq49342 Length=63967 Score = 125 bits (138), Expect = 9e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | ||||||||| || ||||||||||| || | | || Sbjct 13995 GCTTGGCCAGCTCTCCTGGGAGCAGCAGGCGCACTGCTGTCTGGATCTCCCGGGAGGTGA 13936 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | || ||||| ||| || || ||||||| || | | Sbjct 13935 TGGTGGAACGCTTGTTGTAATGGGCCAGGCGGGACGCTTCTCCAGCGATGCGCTCAAAGA 13876 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||||| ||||| |||| ||||||||| |||||||| Sbjct 13875 TGTCATTAACGAAGGAGTTCATGATGCCCATCGCCTTGGAGGAGATGCCGGTGTCGGGGT 13816 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 13815 GGACCTGCTTCAGCACCTTGTAGA 13792 >seq180611 Length=3902 Score = 122 bits (134), Expect = 1e-21 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||||||| || ||| | || || ||||| ||||||||||| || | ||| ||| Sbjct 2979 GCCAGTTCACCAGGCAGTAAGAGCCGTACGGCAGTCTGGATCTCCCGAGAAGTGATGGTG 2920 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| |||| ||||| ||| || || | ||||||| || | ||||| Sbjct 2919 GAGCGCTTGTTGTAGTGTGCCAGGCGGGAAGCTTCACCGGCGATGCGCTCAAAGATGTCA 2860 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||| | |||| ||||| || ||||||||||||| Sbjct 2859 TTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATACCAGTGTCGGGGTGCACC 2800 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 2799 TGCTTCAGCACCTTGTA 2783 >seq29365 Length=1729 Score = 120 bits (132), Expect = 4e-21 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || ||||| || ||||||||||| || | || ||| ||| ||||| |||||||| Sbjct 962 AGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTATGGTGGAGCGTTTGTTGTAGTGCGCC 903 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || || ||| ||| | ||||||| |||| |||||||| || || |||||||||| Sbjct 902 AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTAACGAAGGAGTTCATGATG 843 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||||| |||||||||||||||||| || |||||||| Sbjct 842 CTCATGGCCTTGGACGAGATGCCAGTGTCGGGGTGCACCTGCTTCAGTACCTTGTA 787 >seq167083 Length=2269 Score = 111 bits (122), Expect = 2e-18 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 1254369 AGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCC 1254428 || ||||| || ||||||||||| || | || ||| ||||||||| |||| ||| Sbjct 898 AGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTATGGTGGAGCGCTTGTTGTAGTGTGCC 839 Query 1254429 AGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACC 1254488 || || ||| ||| | ||||||| |||| || || ||||| || |||||||||| Sbjct 838 AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGATATCATTGACGAAGGAGTTCATGATG 779 Query 1254489 GACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct 778 CCCATGGCCTTGGACGAGATGCCAGTATCGGGGTGCACTTGCTTCAGCACCTTGTA 723 >seq36262 Length=3370 Score = 111 bits (122), Expect = 2e-18 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 1254381 GTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCC 1254440 ||||||||||| || | ||| ||| ||| ||||| |||||||||| || ||| Sbjct 875 GTCTGGATCTCCCGAGAAGTGATGGTGGAGCGTTTGTTGTAGTGCGCCAGGCGCGAGGCT 816 Query 1254441 TCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG 1254500 ||| ||||||| |||| ||||||||||| || |||||||||| ||||| ||| Sbjct 815 TCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATCGCCTTT 756 Query 1254501 TTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||||| ||| |||||||||||||||||| | ||| ||||| Sbjct 755 GACGAGATACCCGTGTCGGGGTGCACCTGCTTCAACACTTTGTA 712 >seq20774 Length=4221 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | ||| ||||| || ||||||||||| || | | Sbjct 3338 GCTTGGCCAACTCACCCGGCAGCAACAGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTA 3397 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| |||||||||| || ||| || | | || || || | | Sbjct 3398 TGGTGGAACGCTTGTTGTAGTGCGCCAGGCGCGAGGCTTCACCGGCAATACGCTCAAAAA 3457 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | |||| ||| ||||| |||||||| Sbjct 3458 TGTCGTTAACGAAAGAGTTCATGATGCCCATGGCCTTGGAGGAAATGCCTGTGTCGGGGT 3517 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| || |||||||| Sbjct 3518 GCACCTGCTTCAGGACCTTGTA 3539 >seq88221 Length=1045 Score = 98.7 bits (108), Expect = 1e-14 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 1628167 ACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTC 1628226 ||||| || || ||||||||| | | | || |||||||||||||||||| | || Sbjct 732 ACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTC 791 Query 1628227 AGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACG 1628286 |||| || ||| |||| |||||||||||| | ||||||||| |||| | | ||| | Sbjct 792 CTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCAGTCTGTGACTCGATG 851 Query 1628287 ATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCT 1628335 |||| |||||| ||| | || ||| || | ||| ||||||||| Sbjct 852 ATGGAGTACCAGAGCTGCTGGGCCTTCACCACCCTGCGCACGCGGCCCT 900 >seq43354 Length=13726 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAA-GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAA 1592244 || || || ||||| |||||||| | || |||| ||| | ||||||| | || || || Sbjct 6684 GCTGCAAATTACCTGGACATCAAAGGCT-TGCTTGATGTCACGTGCAAGACAGTTGCAAA 6742 Query 1592245 CATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 |||||||||||| ||| | || || || |||||||||||||| ||||||||| Sbjct 6743 CATGATCAAGGGGAAGACTCCAGAAGAAATCCGCAAGACCTTCAACATCAAG 6794 >seq36587 Length=4577 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | || ||||| || ||||||||||| || | || Sbjct 582 GCTTGGCCAGCTCACCAGGAAGCAGGAGCCGCACAGCCGTCTGGATCTCCCGAGAAGTGA 523 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| | |||||||| || ||||| |||| || |||| | Sbjct 522 TGGTGGAGCGTTTGTTGTAATGCGCCAGGCGAGAAGCCTCACCAGCGATACGCTCGAAGA 463 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || || ||||| | ||| | |||| || |||||| ||||||| Sbjct 462 TGTCATTCACGAAAGAATTCATAATGCCCATAGCCTTGGAAGAAATGCCCGTATCGGGGT 403 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| |||||||| || Sbjct 402 GCACCTGCTTCAGCACCTTATA 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6092123496692758