Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22]
182,974 sequences; 1,175,404,042 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq116889 104 2e-17
seq144538 98.7 9e-16
>seq116889
Length=707
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | || || || || || || || || || || || || || |||
Sbjct 409 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 468
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||| ||||| ||||||||||| || ||||| || ||
Sbjct 469 GACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAG 528
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||| || || || |||||||| || | | | |||| || ||||||
Sbjct 529 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTATAAC 588
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || |||||||| || || || | ||| ||||
Sbjct 589 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTGCG 623
>seq144538
Length=901
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || ||| |
Sbjct 195 ATGCAGATCTTCGTGAAGACACTCACTGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 136
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| ||||| || || ||||| ||
Sbjct 135 GACACCATTGAGAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCACCCGACCAG 76
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | |||| || || |||
Sbjct 75 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCTGACTACAAC 16
Query 24884 ATTCAAAAGGAATC 24897
|| || ||||||||
Sbjct 15 ATCCAGAAGGAATC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448868605456720
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |