Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq167228 183 5e-40 seq49342 183 5e-40 seq108764 179 6e-39 seq180611 159 5e-33 seq20774 156 7e-32 seq167083 154 2e-31 seq75918 125 1e-22 seq29365 120 5e-21 seq36262 107 3e-17 seq36587 105 1e-16 seq26289 100 4e-15 >seq167228 Length=2796 Score = 183 bits (202), Expect = 5e-40 Identities = 187/244 (77%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||||||||| ||||| |||||| ||||||| || || ||| Sbjct 1916 TGTACTTGGTGACAGCCTTGGTACCCTCGGAGACTGCGTGCTTGGCCAGCTCACCCGGCA 1975 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||||||||| || | ||| ||| ||| ||||| | Sbjct 1976 GCAGAAGCCGCACGGCCGTCTGGATCTCCCGAGAAGTGATGGTGGAGCGTTTGTTGTAGT 2035 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| |||| || ||| ||||||| |||| ||||||||||| || ||||||| Sbjct 2036 GCGCCAAGCGGGAAGCTTCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCA 2095 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || || |||||| |||||||||||||||||| |||||||||| Sbjct 2096 TGATACCCATGGCCTTAGAAGAAATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 2155 Query 1485710 AAAC 1485713 | || Sbjct 2156 ACAC 2159 >seq49342 Length=63967 Score = 183 bits (202), Expect = 5e-40 Identities = 194/256 (76%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||||||||| |||||| ||||||| || || | | Sbjct 14034 TGTACTTGGTGACAGCCTTGGTGCCCTCTGAGACAGCGTGCTTGGCCAGCTCTCCTGGGA 13975 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || ||||||||||| |||| | ||| ||| |||||||| Sbjct 13974 GCAGCAGGCGCACTGCTGTCTGGATCTCCCGGGAGGTGATGGTGGAACGCTTGTTGTAAT 13915 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| || || ||||||| || | ||||| || || || ||||||| Sbjct 13914 GGGCCAGGCGGGACGCTTCTCCAGCGATGCGCTCAAAGATGTCATTAACGAAGGAGTTCA 13855 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| ||| ||||||||| ||||||||| |||||||| |||||||||| Sbjct 13854 TGATGCCCATCGCCTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGT 13795 Query 1485710 AAACAAAGGACGAGTA 1485725 | ||| || ||||| Sbjct 13794 AGACATAGATGGAGTA 13779 >seq108764 Length=893 Score = 179 bits (198), Expect = 6e-39 Identities = 186/244 (76%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||||||| ||||||| |||||| ||| Sbjct 303 TGTACTTGGTGACCGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCGCCGGGCA 244 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| | |||||| ||||||||||| | || | ||| ||| |||||| || Sbjct 243 GCAGCAGCCTCACGGCCGTCTGGATCTCCCTGGAGGTGATAGTGGAGCGCTTATTGTAAT 184 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||| ||| || || | ||||||| |||| |||||||||||||| ||||||| Sbjct 183 GCGCCAAGCGCGACGCTTCCCCGGCGATGCGCTCGAAGATGTCGTTGACAAAGGAGTTCA 124 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | || |||||||| ||| ||||| |||||||| |||||||||| Sbjct 123 TGATGCCCATGGCCTTAGAAGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGT 64 Query 1485710 AAAC 1485713 | || Sbjct 63 ATAC 60 >seq180611 Length=3902 Score = 159 bits (176), Expect = 5e-33 Identities = 181/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||| ||||| |||||||| ||||| ||||| ||||| | |||||||| || ||| Sbjct 3021 TACTTAGTGACAGCCTTGGTGCCCTCAGAGACTGCGTGTTTAGCCAGTTCACCAGGCAGT 2962 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || || ||||| ||||||||||| || | ||| ||| ||||||||| | | Sbjct 2961 AAGAGCCGTACGGCAGTCTGGATCTCCCGAGAAGTGATGGTGGAGCGCTTGTTGTAGTGT 2902 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||||||| || || | ||||||| || | ||||| ||||| || ||||||||| Sbjct 2901 GCCAGGCGGGAAGCTTCACCGGCGATGCGCTCAAAGATGTCATTGACGAAGGAGTTCATG 2842 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| ||||| || |||||||||||||||||| ||||||||||| Sbjct 2841 ATGCCCATGGCCTTGGACGAGATACCAGTGTCGGGGTGCACCTGCTTCAGCACCTTGTAC 2782 Query 1485712 ACA 1485714 ||| Sbjct 2781 ACA 2779 >seq20774 Length=4221 Score = 156 bits (172), Expect = 7e-32 Identities = 181/244 (74%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| |||||| |||||| || || ||| Sbjct 3299 TGTACTTGGTGACAGCCTTGGTGCCCTCGGAGACTGCGTGCTTGGCCAACTCACCCGGCA 3358 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||| ||||| || ||||||||||| || | || ||| |||||||| | Sbjct 3359 GCAACAGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTATGGTGGAACGCTTGTTGTAGT 3418 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| ||| || | | || || || | |||||||| || || ||||||| Sbjct 3419 GCGCCAGGCGCGAGGCTTCACCGGCAATACGCTCAAAAATGTCGTTAACGAAAGAGTTCA 3478 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||| ||||| |||||||||||||||||| || ||||||| Sbjct 3479 TGATGCCCATGGCCTTGGAGGAAATGCCTGTGTCGGGGTGCACCTGCTTCAGGACCTTGT 3538 Query 1485710 AAAC 1485713 | || Sbjct 3539 ACAC 3542 >seq167083 Length=2269 Score = 154 bits (170), Expect = 2e-31 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||| |||||||| ||||| ||||| |||||| | ||||| || || | | Sbjct 961 TACTTGGTGACAGCCTTGGTGCCCTCAGAGACTGCGTGCTTAGCCAGCTCACCAGGAAGC 902 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || ||||| || ||||||||||| || | || ||| ||||||||| | | Sbjct 901 AGGAGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTATGGTGGAGCGCTTGTTGTAGTGT 842 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||||||| ||| ||| | ||||||| |||| || || ||||| || ||||||||| Sbjct 841 GCCAGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGATATCATTGACGAAGGAGTTCATG 782 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711 || ||| | ||| |||||||| ||||||||||| ||||| ||||||||||| Sbjct 781 ATGCCCATGGCCTTGGACGAGATGCCAGTATCGGGGTGCACTTGCTTCAGCACCTTGTAC 722 Query 1485712 ACA 1485714 ||| Sbjct 721 ACA 719 >seq75918 Length=26761 Score = 125 bits (138), Expect = 1e-22 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| ||||| || ||| ||||||| || || ||| Sbjct 12212 TGTACTTGGTGACAGCCTTGGTGCCCTCAGAGACAGCATGCTTGGCCAGCTCACCAGGCA 12271 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||| ||||| | ||| ||| || ||| ||| ||| || | || | Sbjct 12272 GTAGGAGCCGCACGGCCGTCTGCACCTCCCGGCTGGTGATGGTGGAGCG-GTGATTGTAC 12330 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||||||| |||||| | | | | || || | | || |||||||| |||||| Sbjct 12331 TGGGCCAGGCGAGAGGCCTCCGAGGCCAGACGTTCAAAGAGATCATTGACAAAGGAGTTC 12390 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1485696 ||||| ||| | || ||||||||| ||| |||||||||||| Sbjct 12391 ATGATGCTCATGGCCTTAGAGGAGATGCCAGTGTCCGGGTGCACCTGC 12438 >seq29365 Length=1729 Score = 120 bits (132), Expect = 5e-21 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 1485535 AGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCC 1485594 || ||||| || ||||||||||| || | || ||| ||| ||||| | ||||| Sbjct 962 AGCCGCACAGCCGTCTGGATCTCCCGAGAAGTTATGGTGGAGCGTTTGTTGTAGTGCGCC 903 Query 1485595 AGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATC 1485654 ||||| ||| ||| | ||||||| |||| |||||||| || || ||||||||||| Sbjct 902 AGGCGCGAGGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTAACGAAGGAGTTCATGATG 843 Query 1485655 GACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAACA 1485714 ||| | ||| |||||||| |||||||||||||||||| || |||||||| || Sbjct 842 CTCATGGCCTTGGACGAGATGCCAGTGTCGGGGTGCACCTGCTTCAGTACCTTGTACACG 783 Query 1485715 AAGGACGAGTA 1485725 || |||||| Sbjct 782 TAGATCGAGTA 772 >seq36262 Length=3370 Score = 107 bits (118), Expect = 3e-17 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 1485547 GTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCC 1485606 ||||||||||| || | ||| ||| ||| ||||| | |||||||||| ||| Sbjct 875 GTCTGGATCTCCCGAGAAGTGATGGTGGAGCGTTTGTTGTAGTGCGCCAGGCGCGAGGCT 816 Query 1485607 TCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTG 1485666 ||| ||||||| |||| ||||||||||| || ||||||||||| ||||| || Sbjct 815 TCGCCAGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATCGCCTTT 756 Query 1485667 TTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 ||||| ||| |||||||||||||||||| | ||| ||||| || Sbjct 755 GACGAGATACCCGTGTCGGGGTGCACCTGCTTCAACACTTTGTACAC 709 Score = 93.3 bits (102), Expect = 7e-13 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || |||||||||||||| ||||| |||||| ||||||| || || ||| Sbjct 1142 TGTACTTGGTAACAGCCTTGGTACCCTCGGAGACTGCGTGCTTGGCCAGCTCACCCGGCA 1083 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 | || |||||||| ||||||||||| || Sbjct 1082 GCAGGAGCCGCACGGCCGTCTGGATCTCCCG 1052 >seq36587 Length=4577 Score = 105 bits (116), Expect = 1e-16 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 1485493 CCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGG 1485552 ||||| ||||| |||||| ||||||| || || | | | || ||||| || |||||| Sbjct 598 CCCTCGGAGACTGCGTGCTTGGCCAGCTCACCAGGAAGCAGGAGCCGCACAGCCGTCTGG 539 Query 1485553 ATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTG 1485612 ||||| || | ||| ||| ||| ||||| |||||||||| ||||| Sbjct 538 ATCTCCCGAGAAGTGATGGTGGAGCGTTTGTTGTAATGCGCCAGGCGAGAAGCCTCACCA 479 Query 1485613 CCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAG 1485672 |||| || |||| ||||| || || || || ||||| || ||| | ||| || Sbjct 478 GCGATACGCTCGAAGATGTCATTCACGAAAGAATTCATAATGCCCATAGCCTTGGAAGAA 419 Query 1485673 ATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 |||||| ||||||||||||||||| |||||||| || || Sbjct 418 ATGCCCGTATCGGGGTGCACCTGCTTCAGCACCTTATACAC 378 >seq26289 Length=38760 Score = 100 bits (110), Expect = 4e-15 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| || ||||| ||||||||||| ||||| |||||||||| ||| || ||| Sbjct 1308 ACCTCCTCCGCCGTCCAGAAGGAGGCCTCAGCCTTCTTGTACATCTGCCAAATATCGTGG 1367 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || |||||||||| | || ||||| |||||| || || ||||||||||| Sbjct 1368 TACTGGATGGGGAATATGACGAAGCGGCGGGGGTTGTCCCGCAGCAGCGGCTC 1420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7896782621075586