Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq116889 136 3e-27 seq144538 113 3e-20 seq45594 93.3 3e-14 >seq116889 Length=707 Score = 136 bits (150), Expect = 3e-27 Identities = 161/216 (75%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | |||| |||||||| ||||||||||| || ||| |||| | || Sbjct 621 CAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTGCGTCCGTC 562 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| | |||||||| | || | || || ||||| Sbjct 561 TTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTC 502 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | |||||| || || || || || | ||| ||| ||| || |||| ||| ||| Sbjct 501 CTGGATTTTTGCCTTCAC--ATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATG 444 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || |||||||| ||||||||||||||| Sbjct 443 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 408 >seq144538 Length=901 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || ||| |||| |||| ||||| ||||| || || ||| Sbjct 5 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 64 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| | |||||||| | || | || |||||||| | || || || ||| Sbjct 65 ATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTC 124 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || ||| ||| || || | ||| |||||||| || ||||| ||||| || Sbjct 125 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACG 184 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 185 AAGATCTGCATG 196 >seq45594 Length=40842 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || ||||||| | ||| || || || | |||| |||||||| ||||| ||||| || Sbjct 40661 CCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAC 40720 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| ||||| ||||| || ||||||||||| | |||||||| | || Sbjct 40721 AGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGA 40780 Query 34871 ACCCCCTCCTTGTC 34884 | || |||||||| Sbjct 40781 ATGCCTTCCTTGTC 40794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324966506480906