Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq144538 132 5e-26 seq116889 127 2e-24 seq88221 95.1 1e-14 seq45594 93.3 4e-14 >seq144538 Length=901 Score = 132 bits (146), Expect = 5e-26 Identities = 149/197 (76%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133466 GGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCG 133524 ||| || ||||| || ||||| || || ||| | | | || || ||||||||||| | Sbjct 1 GGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCTGCTTGCCAG 59 Query 133525 CGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGA 133584 | | || |||| |||||||||||| || |||||||||||||| |||||| ||| | Sbjct 60 CAAAGATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCA 119 Query 133585 GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTT 133644 | ||||| |||||| |||||||||| || | ||||| ||| ||||| || || || | Sbjct 120 CGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCT 179 Query 133645 TTACGAAAATCTGCATG 133661 | ||||| ||||||||| Sbjct 180 TCACGAAGATCTGCATG 196 >seq116889 Length=707 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| || ||||| || || || || || ||| ||| || ||||| Sbjct 612 ATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTGCGTCCGTCTTCCAGCTG 553 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | || |||| ||||||||| ||||| |||||||| ||||| ||| || Sbjct 552 CTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTT 493 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 | ||| | | ||||| ||||| ||||||| || || | ||||| ||| ||||| || Sbjct 492 TGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 433 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || ||||||||| Sbjct 432 CAGGGTCTTCACAAAGATCTGCATG 408 >seq88221 Length=1045 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 148866 TACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 ||||| ||||| || | ||||| |||||||||||||| ||||| ||||| || ||| Sbjct 726 TACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTG 785 Query 148926 CTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTC 148975 ||||| |||||||| | ||| ||||| |||||||| ||| ||| || || Sbjct 786 CTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTC 835 >seq45594 Length=40842 Score = 93.3 bits (102), Expect = 4e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| || ||||| || ||||| || || ||| | | | || || |||| Sbjct 40684 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCA-TCTTCCAGCT 40742 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| | || |||| ||||||||| ||||| |||||||||||||| ||||| Sbjct 40743 GCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 40802 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTC 133615 | ||| | | |||| ||||| ||||||| || || Sbjct 40803 TGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCAACCTC 40842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482315132031760