Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq26219 118 3e-23 seq168461 105 2e-19 seq157125 98.7 3e-17 seq154470 96.9 1e-16 seq101488 95.1 4e-16 >seq26219 Length=36809 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 12010 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 12069 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 12070 CCCGGGCTTCAGC 12082 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 28574 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 28515 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 28514 CCCGGGCTTCAGC 28502 >seq168461 Length=10939 Score = 105 bits (116), Expect = 2e-19 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2472 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2531 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 2532 CCGGGTTT 2539 >seq157125 Length=3247 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3137 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3078 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3077 CCGGGTTTCGGC 3066 >seq154470 Length=211 Score = 96.9 bits (106), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 132 AAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTGAAGGTCCCTGGTTTGATCCCGG 73 Query 2833 GCTTCAGC 2840 | |||||| Sbjct 72 GTTTCAGC 65 >seq101488 Length=1052 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||||||||| || |||||||||||||||||||||||||||||| | | Sbjct 980 GCCGAAATAGCTCAGTTGGGAGTGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1039 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1040 CCGGGTTTCGGC 1051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15817880542230