Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq108764 149 9e-30 seq167228 143 4e-28 seq180611 131 2e-24 seq167083 131 2e-24 seq49342 131 2e-24 seq20774 125 1e-22 seq29365 109 8e-18 seq36587 107 3e-17 seq88221 102 1e-15 seq26289 98.7 1e-14 seq75918 91.5 2e-12 seq36262 87.8 3e-11 >seq108764 Length=893 Score = 149 bits (164), Expect = 9e-30 Identities = 171/229 (75%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| ||||| |||| |||| || ||| ||||| Sbjct 63 TACAAGGTGCTGAAGCAGGTCCACCCGGACACCGG-----CATC-TCTTCTAAGGCCATG 116 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| | || || ||| Sbjct 117 GGCATCATGAACTCCTTTGTCAACGACATCTTCGAGCGCATCGCCGGGGAAGCGTCGCGC 176 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| | ||| |||||| ||| ||| | | | ||||||||||| |||||| | Sbjct 177 TTGGCGCATTACAATAAGCGCTCCACTATCACCTCCAGGGAGATCCAGACGGCCGTGAGG 236 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| ||||||||| ||||||||||||| Sbjct 237 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 285 >seq167228 Length=2796 Score = 143 bits (158), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || |||| | || | | || ||||| Sbjct 2156 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC----GGGCATTTCTTCTA--AGGCCATG 2103 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||| || ||| Sbjct 2102 GGTATCATGAACTCTTTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAAGCTTCCCGC 2043 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||||| || |||||| ||| ||| ||| | || ||||||||||| |||||||| Sbjct 2042 TTGGCGCACTACAACAAACGCTCCACCATCACTTCTCGGGAGATCCAGACGGCCGTGCGG 1983 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || || ||||||| |||||| ||||||||||| |||| Sbjct 1982 CTTCTGCTGCCGGGTGAGCTGGCCAAGCACGCAGTCTCCGAGGGTACCA 1934 >seq180611 Length=3902 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || | | ||| || |||| ||||| Sbjct 2783 TACAAGGTGCTGAAGCAGGTGCACCCCGACACTGGT-----ATC-TCGTCCAAGGCCATG 2836 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| | || ||||||| | || || ||| Sbjct 2837 GGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATCGCCGGTGAAGCTTCCCGC 2896 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| ||| | || ||||||||||| ||||| || Sbjct 2897 CTGGCACACTACAACAAGCGCTCCACCATCACTTCTCGGGAGATCCAGACTGCCGTACGG 2956 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || |||||||| | ||||| ||||| |||||||||| Sbjct 2957 CTCTTACTGCCTGGTGAACTGGCTAAACACGCAGTCTCTGAGGGCACCA 3005 >seq167083 Length=2269 Score = 131 bits (144), Expect = 2e-24 Identities = 168/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| ||||||||| || ||| |||| || |||| ||||| Sbjct 723 TACAAGGTGCTGAAGCAAGTGCACCCCGATAC---TGG--CATC-TCGTCCAAGGCCATG 776 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| || || |||| ||||||| | ||| ||| ||| Sbjct 777 GGCATCATGAACTCCTTCGTCAATGATATCTTCGAGCGCATCGCCGGCGAAGCCTCGCGC 836 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||| | || |||||||||| ||| || | || ||||||||||| || ||||| Sbjct 837 CTGGCACACTACAACAAGCGCTCCACCATAACTTCTCGGGAGATCCAGACGGCTGTGCGG 896 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | | | || || ||||| | |||||| ||||| |||||||||| Sbjct 897 CTCCTGCTTCCTGGTGAGCTGGCTAAGCACGCAGTCTCTGAGGGCACCA 945 >seq49342 Length=63967 Score = 131 bits (144), Expect = 2e-24 Identities = 176/244 (72%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||||| |||||||| |||||| |||| |||| Sbjct 13779 TACTCCATCTATGTCTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC- 13832 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| |||| | ||| ||||||||||| || || || ||||| | || ||||||| Sbjct 13833 TCCTCCAAGGCGATGGGCATCATGAACTCCTTCGTTAATGACATCTTTGAGCGCATCGCT 13892 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || || |||||||| | | ||||||||| ||| ||| | | || |||||| Sbjct 13893 GGAGAAGCGTCCCGCCTGGCCCATTACAACAAGCGTTCCACCATCACCTCCCGGGAGATC 13952 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| || ||||||||| | | | || || ||||||| |||||| ||||| |||||| Sbjct 13953 CAGACAGCAGTGCGCCTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCTGTCTCAGAGGGC 14012 Query 725139 ACCA 725142 |||| Sbjct 14013 ACCA 14016 >seq20774 Length=4221 Score = 125 bits (138), Expect = 1e-22 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || | ||| ||| |||| ||||| Sbjct 3539 TACAAGGTCCTGAAGCAGGTGCACCCCGACACAGG-----CATT-TCCTCCAAGGCCATG 3486 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| | || || || | | || ||| ||| Sbjct 3485 GGCATCATGAACTCTTTCGTTAACGACATTTTTGAGCGTATTGCCGGTGAAGCCTCGCGC 3426 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || ||||||||| ||| || | || ||||||||||| || ||||| Sbjct 3425 CTGGCGCACTACAACAAGCGTTCCACCATAACTTCTCGGGAGATCCAGACGGCTGTGCGG 3366 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| || || |||||| |||||| |||||||||||||||| Sbjct 3365 CTGTTGCTGCCGGGTGAGTTGGCCAAGCACGCAGTCTCCGAGGGCACCA 3317 >seq29365 Length=1729 Score = 109 bits (120), Expect = 8e-18 Identities = 135/182 (74%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || ||| |||| || |||| ||||| Sbjct 787 TACAAGGTACTGAAGCAGGTGCACCCCGACAC---TGG--CATC-TCGTCCAAGGCCATG 840 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || || |||||||| |||| ||||||| | ||| ||| ||| Sbjct 841 AGCATCATGAACTCCTTCGTTAACGACATCTTCGAGCGCATCGCCGGCGAAGCCTCGCGC 900 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||| ||| ||| || | || ||||||||||| || ||||| Sbjct 901 CTGGCGCACTACAACAAACGCTCCACCATAACTTCTCGGGAGATCCAGACGGCTGTGCGG 960 Query 725094 CT 725095 || Sbjct 961 CT 962 >seq36587 Length=4577 Score = 107 bits (118), Expect = 3e-17 Identities = 159/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || |||||||| ||||||||||||||| || |||| | || | |||| | ||| Sbjct 381 TATAAGGTGCTGAAGCAGGTGCACCCCGATAC----GGGCATTTCTTC--CAAGGCTATG 434 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || ||||| || || || || ||||| |||| || |||| ||||| |||| Sbjct 435 GGCATTATGAATTCTTTCGTGAATGACATCTTCGAGCGTATCGCTGGTGAGGCTTCTCGC 494 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||| ||| ||| ||| | || ||||||||||| || ||||| Sbjct 495 CTGGCGCATTACAACAAACGCTCCACCATCACTTCTCGGGAGATCCAGACGGCTGTGCGG 554 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 || | | | || || ||||||| |||||| ||||||||||| Sbjct 555 CTCCTGCTTCCTGGTGAGCTGGCCAAGCACGCAGTCTCCGAGGG 598 >seq88221 Length=1045 Score = 102 bits (112), Expect = 1e-15 Identities = 107/139 (77%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| |||||| |||| ||| | | || | ||||||||||| ||||||||| ||||| Sbjct 868 CAGCTCTGGTACTCCATCATCGAGTCACAGACTGAGACCGGCACACCCTACATGCTCTAC 809 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGC--CA 262208 || ||| || |||| || ||||||||||||||||||||||||| || | || || Sbjct 808 AAAGACTCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCA--TCAAATGCAGCA 751 Query 262209 ACCTGTGCACCGAGATCGT 262227 ||||||| || || ||||| Sbjct 750 ACCTGTGTACAGAAATCGT 732 >seq26289 Length=38760 Score = 98.7 bits (108), Expect = 1e-14 Identities = 91/114 (80%), Gaps = 1/114 (1%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||||||| || ||||| |||||| ||| | |||||||||| ||||| Sbjct 1420 GAGCCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATATTCCCCATCCAGTACCACGAT 1361 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| ||||| ||||||||||| ||||| || |||||||| Sbjct 1360 ATTTGGCAGATGTA-CAAGAAGGCTGAGGCCTCCTTCTGGACGGCGGAGGAGGT 1308 >seq75918 Length=26761 Score = 91.5 bits (100), Expect = 2e-12 Identities = 127/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| |||||||| || | | || || | | | | ||| Sbjct 12407 AAGGCCATGAGCATCATGAACTCCTTTGTCAATGATCTCTTTGAACGTCTGGCCTCGGAG 12348 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 ||| ||||||||| | | ||| | ||| ||| ||| || || ||| | ||||| Sbjct 12347 GCCTCTCGCCTGGCCCAGTACAATCACCGCTCCACCATCACCAGCCGGGAGGTGCAGACG 12288 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| || | ||| || || ||||||| ||| || ||||| |||||||||| Sbjct 12287 GCCGTGCGGCTCCTACTGCCTGGTGAGCTGGCCAAGCATGCTGTCTCTGAGGGCACCA 12230 >seq36262 Length=3370 Score = 87.8 bits (96), Expect = 3e-11 Identities = 122/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||| ||| | ||||||||||||||| || | | ||| || ||| | ||| Sbjct 712 TACAAAGTGTTGAAGCAGGTGCACCCCGACACGGGT-----ATC-TCGTCAAAGGCGATG 765 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| ||| ||| ||| Sbjct 766 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCTGGCGAAGCCTCGCGC 825 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 ||||||| || |||||| ||| ||| ||| | || ||||||||||| Sbjct 826 CTGGCGCACTACAACAAACGCTCCACCATCACTTCTCGGGAGATCCAGAC 875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7160163021393788