Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq144538 120 3e-22 seq116889 114 1e-20 seq45594 87.8 2e-12 >seq144538 Length=901 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| || | || ||||||||||| || ||||| Sbjct 5 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 64 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | Sbjct 65 ATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTC 124 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||||| | |||||||||| ||||| || || || || | || ||||| Sbjct 125 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACG 184 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 185 AAGATCTGCAT 195 >seq116889 Length=707 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||| || || | || ||| || |||| ||||||||||| || || || Sbjct 599 TCCTTCTGGATGTTATAGTCAGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCAGCGAAG 540 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||||| || || |||||| ||| ||| ||||| | | Sbjct 539 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTCACATTC 480 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || |||||| Sbjct 479 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 420 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 419 AAGATCTGCAT 409 >seq45594 Length=40842 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| || | || ||||||||||| || || || Sbjct 40697 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAG 40756 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||||| || ||||||||| |||||| ||||| || Sbjct 40757 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTT 40816 Query 35666 GCCACCGTGTCGCTCGATTCCACCTC 35691 | | ||||| || | || ||||| Sbjct 40817 TCAATGGTGTCACTGGGCTCAACCTC 40842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449762556147920