Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq88221 95.1 2e-14 seq56122 86.0 8e-12 >seq88221 Length=1045 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 111278 GTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 111337 || ||||| | ||||||||||| | |||| | || || || |||| |||| ||| Sbjct 723 GTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGG 782 Query 111338 TTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 111397 || |||||| ||||||| | || ||||||||||||||||| || || ||||| |||||| Sbjct 783 TTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCAGTCTGT 842 Query 111398 GA 111399 || Sbjct 843 GA 844 >seq56122 Length=31370 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||||| | |||||||||||| ||||| || |||||||| || |||| ||||| Sbjct 23628 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGCCCTGGCATCAGGCCCCTCTTCT 23569 Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 ||| |||| | ||||| ||| || || || || |||||||| || || || ||||| Sbjct 23568 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAG 23510 Query 122797 GCAA 122800 |||| Sbjct 23509 GCAA 23506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626595580910400