Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq125744 224 1e-53 seq69352 114 2e-20 seq63428 114 2e-20 >seq125744 Length=1335 Score = 224 bits (248), Expect = 1e-53 Identities = 623/939 (66%), Gaps = 36/939 (4%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| |||||||| ||||| |||||||||||||| || || ||||| |||| Sbjct 227 CCGCTGAGCCAGGAAGAGGAAGAGTTCCCCATCGCCTACTCCATGGTCATCCATAACAAA 286 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 || |||||||||||||| |||||| || || |||| ||||| ||||| ||||||||||| Sbjct 287 ATTGAGATGTTCGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAATGTCTACTGCGTC 346 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGG--GGCGTCTCGGCCATCGCCAGGT 13848 ||| |||| ||||||| | || ||| | || | ||| |||||||| | Sbjct 347 CACATGGATAACAAGTCCCCAGCCGCCTTC--CAGGAAGCCGTGCGGGCCATCGTAGCCT 404 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 ||||||| ||||| |||| || ||| | ||||||| || | ||||||| | Sbjct 405 GCTTCCCCAACGTCTTTGTGGCGAGCCACCTGGAAAACGTGGTCTATGCCTCCTGGTCCC 464 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAG 13966 | ||||||||||||||| ||||||| ||||||| | | | ||| | ||| Sbjct 465 GGCTGCAGGCCGACCTCAACTGCATGCAGGACCTGTTGCAGAGT--CCCATTCCCTGGCA 522 Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||| | |||||| ||||| | || ||||| ||||||| ||| ||||| || || Sbjct 523 CTACGTCCTCAACACCTGCGGCACTGATTTCCCCATCAAGACGAACGCCGAGATTGTCCG 582 Query 14027 GGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCC--CAAC-CA 14083 || ||||||| ||| || |||| | ||||| ||| | ||| || | | Sbjct 583 TGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCGGAG---AAGCCGTCAGCACT 639 Query 14084 CAAGCTGCACCGC-ATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCAACA 14142 ||||| ||| ||| || | | |||| |||| |||| | || | || | Sbjct 640 CAAGCAGCAGCGCTGGCAATACCA-CCACGAGGTG--CAGCAG----GTCATCTTCCGGA 692 Query 14143 CCGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACT 14202 | | || || || ||||| || | || |||||| || | || ||||| ||| Sbjct 693 CAGCCACCAAGAAACTGCCGCCTCCCCACAACTACCCCATGTTCACTGGTAACGCATACG 752 Query 14203 TTGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC--- 14259 | | | ||||||| | |||||| | | || || ||||| || | || | || Sbjct 753 TCGTGATCACCCGTGCCTTCGTGCAGCACATCTTCGAGGAC---CCCGCAGCGCAGCAGT 809 Query 14260 TCATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGA 14319 || | | ||| | ||||||| |||||||| ||||||||| | |||||||| | | Sbjct 810 TCCTCGAGTGGGCCAAGGACACCTACAGCCCTGACGAGCACGTCTGGGCCACGCTCAACC 869 Query 14320 GAATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGT 14379 | || || |||||| | || ||| ||| ||||| | | |||||||||| Sbjct 870 GTGTGCCTGGTGTGCCCGGCGCCATGCCCCCGAACGACAAGTTCCAGCTCTCGGACATGA 929 Query 14380 GGGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCC 14439 ||| | | | | ||||||||| | ||| |||||||| | || || || || | Sbjct 930 ACGCCCTGCCCCGTCTGGTCAAGTGGGAGTACCTGGAGGGGGACACCAGCAAGGGCGCGC 989 Query 14440 TGTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACG 14499 ||||| || ||| |||| || | |||| |||| |||| ||| ||||||| Sbjct 990 CTTACCCACCCTGCACCGGCCAGCATCAGCGCGCCGTCTGTATCTACGGCGTGGGCGACG 1049 Query 14500 TGAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGAC 14558 || ||| || ||| | | ||||| || ||||||||||||||| | | |||| Sbjct 1050 TGCCCTGGATGCTCCAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCTTGGTGGAC 1108 Query 14559 GAGTTCGCCG---TGCGCTGTCTGGACGAGGACGTGCGC 14594 || ||||| | | || ||||| ||| || ||||| Sbjct 1109 GA---CGCCGTTATCCAATGCCTGGAGGAGCACCTGCGC 1144 >seq69352 Length=7906 Score = 114 bits (126), Expect = 2e-20 Identities = 255/377 (68%), Gaps = 12/377 (3%) Strand=Plus/Plus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 ||||||| || || ||||| |||||| || || || |||||| | |||| Sbjct 26 GAAGAGGCCGCCTTCCCCATTGCCTACGTTAT---GACCCTGCACAAGGAGTTTGAGACC 82 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 || ||||| ||| | ||||| | ||| || |||||| |||||||| |||||||||| Sbjct 83 TTTGAGCGGCTCTTCAGGGCAGTGTACATGCCCCAGAACGTCTACTGCATCCACGTGGAT 142 Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG-TGCTTCCCT 13856 ||||| | |||| || | |||| |||| | || || || |||||||| Sbjct 143 GCCAAGGCACCGGCC-CGTTTCCATC--GGGCAGTGCAGCGCCTGCTGGGCTGCTTCCCC 199 Query 13857 AACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916 |||| ||| ||| |||| | | ||||| || ||| | ||| ||| | Sbjct 200 AACGCCTTCCTCGCCTCCCGGACGGAGTGGGTGGTCTATGGCGGCATCTCCCGCCTGCGG 259 Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976 || |||||| ||||||| |||||| ||||| |||| ||| | ||||||||| Sbjct 260 GCTGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTC 319 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 ||| ||||| ||||||||| | |||||||||| ||||| || | | ||||||| Sbjct 320 AACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGAGAGATAGTCCAGCTGCTGAAG 379 Query 14037 GCCCTGGGCGGCAAGAA 14053 | ||| | |||||||| Sbjct 380 GGCCTCAGGGGCAAGAA 396 >seq63428 Length=24199 Score = 114 bits (126), Expect = 2e-20 Identities = 255/377 (68%), Gaps = 12/377 (3%) Strand=Plus/Minus Query 13683 GAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGA---TCGAGATG 13739 ||||||| || || ||||| |||||| || || || |||||| | |||| Sbjct 1488 GAAGAGGCCGCCTTCCCCATTGCCTACGTTAT---GACCCTGCACAAGGAGTTTGAGACC 1432 Query 13740 TTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGAC 13799 || ||||| ||| | ||||| | ||| || |||||| |||||||| |||||||||| Sbjct 1431 TTTGAGCGGCTCTTCAGGGCAGTGTACATGCCCCAGAACGTCTACTGCATCCACGTGGAT 1372 Query 13800 TCCAAGTC--CGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGG-TGCTTCCCT 13856 ||||| | |||| || | |||| |||| | || || || |||||||| Sbjct 1371 GCCAAGGCACCGGCC-CGTTTCCATC--GGGCAGTGCAGCGCCTGCTGGGCTGCTTCCCC 1315 Query 13857 AACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAG 13916 |||| ||| ||| |||| | | ||||| || ||| | ||| ||| | Sbjct 1314 AACGCCTTCCTCGCCTCCCGGACGGAGCGGGTGGTCTATGGCGGCATCTCCCGCCTGCGG 1255 Query 13917 GCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTC 13976 || |||||| ||||||| |||||| ||||| |||| ||| | ||||||||| Sbjct 1254 GCTGACCTCCACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTC 1195 Query 13977 AACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAG 14036 ||| ||||| ||||||||| | |||||||||| ||||| || | | ||||||| Sbjct 1194 AACACCTGCGGCCAGGACTTCCCCTTGAAGACCAACCGAGAGATAGTCCAGCTGCTGAAG 1135 Query 14037 GCCCTGGGCGGCAAGAA 14053 | ||| | |||||||| Sbjct 1134 GGCCTCAGGGGCAAGAA 1118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657232548170240