Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq116889 113 1e-19 seq144538 95.1 3e-14 >seq116889 Length=707 Score = 113 bits (124), Expect = 1e-19 Identities = 162/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | || |||||||| || || || || || |||||||| || || | | || Sbjct 629 CTGAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTG 570 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | || ||||| || || || |||||||| |||||||||||||| | | || ||| Sbjct 569 CGTCCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCT 510 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || || || || |||||| || ||| |||| | | |||| ||| ||| || ||| Sbjct 509 TCTTTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCAACCTCA 453 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || ||||| || || |||||||| |||| |||||| || Sbjct 452 AGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 406 >seq144538 Length=901 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151911 GACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCG 151970 || || || ||||||||||| || | | || | |||||||| || || || || Sbjct 2 GATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCA 61 Query 151971 AAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACA 152030 ||||| |||||||||||||| | | || |||||||| || || || || || || Sbjct 62 AAGATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACG 121 Query 152031 GTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTC 152090 |||| | | |||| ||| || || || || || || ||||| ||||| |||||| Sbjct 122 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTTC 181 Query 152091 ACGAAGACCTGCATTTT 152107 ||||||| |||||| || Sbjct 182 ACGAAGATCTGCATGTT 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151115835159554