Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq116889 150 4e-31 seq79253 84.2 5e-11 >seq116889 Length=707 Score = 150 bits (166), Expect = 4e-31 Identities = 167/221 (76%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || |||||||| ||||| || || ||| Sbjct 412 CAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGA--GCCCAGTG 469 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| || || ||| || |||||||||||||| || ||||| ||||||| Sbjct 470 ACACCATTGAGAATGTGAAGGCAAAAATCCAGGACAAAGAAGGCATTCCTCCTGACCAGC 529 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || |||||||| || || ||||| ||||| ||| | || || | || |||||| Sbjct 530 AGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGACGCACCCTGTCTGACTATAACA 589 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || ||||| || || |||||||| || | |||||| Sbjct 590 TCCAGAAGGAATCCACCCTCCATCTTGTGCTGCGTCTCAGA 630 >seq79253 Length=1694 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 ||| || ||||| |||||||| ||||| ||||| || ||||| ||||||||||||||| | Sbjct 573 AGGCATTCCTCCTGACCAGCAGCGACTGATCTTTGCTGGAAAGCAGCTCGAAGATGGACG 632 Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAG 178110 || || | || || ||| ||||||||| Sbjct 633 CACGCTGTCTGACTACAACATCCAAAAAG 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1200909227494956