Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq116889 147 2e-30 seq144538 129 5e-25 seq45594 100 3e-16 >seq116889 Length=707 Score = 147 bits (162), Expect = 2e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||| ||||| || ||| |||||||| ||||||||||| || |||||||| Sbjct 626 AGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTATAGTCAGACAGGGTGCGT 567 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||| ||||| ||||| | ||| ||||| | |||| || || Sbjct 566 CCGTCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCT 507 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| ||||||| ||||| | | ||||| || | ||| ||||| | || Sbjct 506 TTGTCCTGGATTTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTG 447 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || || ||||| ||||| || || ||||||||||| Sbjct 446 ATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTT 406 >seq144538 Length=901 Score = 129 bits (142), Expect = 5e-25 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||| ||||| || |||||||| | || || ||||||||||| || || Sbjct 5 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAG 64 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| | ||| ||||| | |||| || ||||||||| ||| || ||||| | Sbjct 65 ATCAGCCTCTGCTGGTCGGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTC 124 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | |||||||| | ||||||||||| || || || || || || || ||||| ||| Sbjct 125 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGTGTCTTCACG 184 Query 41852 AAAATCTGCATGTT 41865 || ||||||||||| Sbjct 185 AAGATCTGCATGTT 198 >seq45594 Length=40842 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 || ||| || | || || | ||| ||||| || ||| |||||||| ||||| ||||| Sbjct 40657 ACAGCCACCCCTCAGGCGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 40716 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || |||||||| | || || ||||||||||| ||||| ||||| | ||| ||||| | Sbjct 40717 AGACAGGGTGCGTCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGG 40776 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA 41786 |||| || ||||||||| ||| || ||||| Sbjct 40777 AGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCA 40811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461246629848800