Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq998 95.1 1e-14 >seq998 Length=117795 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/124 (78%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 157106 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACT-TTGATTGCTTTT 157164 |||||||| | ||||| |||||||||||| || ||| ||| | || |||||||| || Sbjct 99131 ACTATTTCTGTACACAGATTGCTGCATTTGAT-GGTCCCCAAATTCTGCTGATTGCTCTT 99189 Query 157165 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 157224 |||||||||| ||||||||| | |||||| |||||||| || || | || ||| || Sbjct 99190 CCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGTGCCAGTCTCTGTCTGGGATTCGAT 99249 Query 157225 GATG 157228 |||| Sbjct 99250 GATG 99253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506516968172160