Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq315 89.7 6e-13 >seq315 Length=1270250 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222 ||||| |||||| |||||||| |||||||||||| |||||||| || || |||||||| Sbjct 390506 TCCTCTTTTCTTCAGCCAAAAAATTGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTCCAC 390447 Query 93223 GGCTGCAAATGCCACAATACGTTC 93246 |||||||| || || | |||||| Sbjct 390446 AGCTGCAAAAGCTACTACACGTTC 390423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556314463869120