Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq998 91.5 2e-13 >seq998 Length=117795 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | || || || | || || || |||||||| ||||| || ||||| ||||| ||| Sbjct 99261 TGGTATGCCATCATCGAATCCCAGACAGAGACTGGCACACCTTACATGCTGTACAAGGAC 99202 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 | || |||| ||||| ||||| |||||||||| ||||| | ||| || ||| Sbjct 99201 TCTTGCAACCGGAAGAGCAATCAGCAGAATTTGGGGACCATCAAATGCAGCAATCTGTGT 99142 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430 |||||||| |||| | ||| |||||||||| Sbjct 99141 ACAGAAATAGTGGAGTATACCAGCAAAGATGAG 99109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620133389631360