Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq315 125 8e-24 >seq315 Length=1270250 Score = 125 bits (138), Expect = 8e-24 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||||| ||| || | ||| |||||||| || | ||| |||||||| |||||||| || Sbjct 390553 TCATCTCGACTGATGAGTTCGTTAGAAAAAGTGAGTCCCGGCATTAATCCTCTTTTCTTC 390494 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | |||||| |||| |||||||| ||||||||||| || ||||| || |||||||| ||| Sbjct 390493 AGCCAAAAAATTGAAGCAAAAGAGCCAGAAAAGAAGATGCCTTCCACAGCTGCAAAAGCT 390434 Query 37320 ACAAGACGT 37328 || | |||| Sbjct 390433 ACTACACGT 390425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591735677987520