Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq315 95.1 1e-14 >seq315 Length=1270250 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/174 (74%), Gaps = 6/174 (3%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAAC-TGCC 21183 ||||| ||||| || | ||||| ||| | ||| | |||||| |||| | | ||| |||| Sbjct 652887 AGCATATGGGGACCAACGTGCGACGGCCTCGATCGTATTGTTGAGCGCT-TCAACATGCC 652829 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGT-C 21241 |||||| ||||| || |||||| || | |||||||||||||| || |||| ||| | | Sbjct 652828 AGAGCTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTACACTGTTGCTGC 652769 Query 21242 AGCTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 || |||| || || || || |||| | |||| || || ||||| || ||| Sbjct 652768 AG--CTTCTACTTTCAATGGATTCCAGAGGCCAACAATACATTATGTGATGTCA 652717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463090815411840