Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq404 86.0 9e-12 >seq404 Length=1135484 Score = 86.0 bits (94), Expect = 9e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 214100 GAGATGTTTGGACTCGTGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCAC 214159 ||| ||||||| | || || ||||| ||| |||| || | || ||||||||||| ||| Sbjct 1057571 GAGGTGTTTGGTTTGGTCCCAGGTTTAATGATGTATGCTACAATATGGCTGAGAGAACAC 1057630 Query 214160 AACAGGGTTTGCGACGTGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTC 214219 || |||| || ||| | |||||||| ||||| || || ||| | || || ||| | ||| Sbjct 1057631 AATCGGGTCTGTGACATCCTGAAACAGGAGCATCCAGAGTGGGATGATGAGCAGTTATTC 1057690 Query 214220 CA 214221 || Sbjct 1057691 CA 1057692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 722631130341120