Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq207 96.9 2e-15 >seq207 Length=1524075 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/180 (72%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||||||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 1115144 GTGACATGGGCGATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGCACTCCT 1115203 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | |||| ||||| Sbjct 1115204 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 1115263 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | | ||||||| || ||||| ||||| | || ||||| || ||| ||| Sbjct 1115264 AACTGGCAAAGAGCATGACAAGGTGGCAAAGCCATCAGAGAAATATCTAGGA-ATTGCAA 1115322 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 1118517 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 1118576 Query 97462 CTATCACAGAAACCAAGCTTATCTA--AATAGGACCTAGATCCATTTGCATCCCAAATGT 97519 || | ||||| ||||||| | ||| || | |||||||| ||||||||||| | Sbjct 1118577 CTGGTGCCAAAACCCTGCTTATCCAGGAAT-TCACGT-GATCCATTGGCATCCCAAATCT 1118634 Query 97520 GCACACCAGATGCTGCAAGCTCTTTG 97545 |||||| ||| | ||||| ||| Sbjct 1118635 TCACACCCTTTGCAGAGAGCTCCTTG 1118660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346699095247730