Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq452 95.1 1e-14 seq534 87.8 2e-12 >seq452 Length=654506 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 14464 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14523 ||| ||||| |||| || ||||| || | |||||||||||| || |||||||||||||| Sbjct 329685 AGTCCTTGA--TGTACGTGTCAATCAGAAGGCTATACATTTCTGAATGTATGTTTTCCAT 329628 Query 14524 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT 14572 || ||||| || ||||| ||||| | |||||||| |||||| ||| Sbjct 329627 GGCGATCTGGAAGCCATAGAAACAACGAGCTTCTGTGATTTGTACTTCT 329579 >seq534 Length=463462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| ||||| ||||| || || || || | ||| ||||||| || | || | Sbjct 279467 CCTCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 279408 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||||| || ||||| || || || || ||||| || || || ||||||||||| | Sbjct 279407 TCAGCCAAAAGATAGCAGCAAACGAGCCCGAGAAGAAGATGCCTTCGACTGCAGCAAAGG 279348 Query 14346 C 14346 | Sbjct 279347 C 279347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482224476990520