Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq339 84.2 3e-11 >seq339 Length=1054384 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 164501 TAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACAT 164560 ||||||| || ||| | ||||| ||| | ||| |||||||||| || || ||||||||| Sbjct 731140 TAGGCTGCAAGCATGTGAAAGGCATTCTGTTATATGGACCTCCAGGCTGTGGTAAAACAC 731081 Query 164561 TAATGGCTCGATGCATTGCTCAAGCTTTTAAATCGC---GACCCGTTAAAATTGTTAATG 164617 | ||||| || |||| |||| | | ||| | || || || | || |||| Sbjct 731080 TTATGGCGAGACAGATTGG-CAAGATGCTGAATGCCAGAGAACCA--AAGGTGGTCAATG 731024 Query 164618 GTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTC 164677 |||| ||| | | || ||||| || || ||||| || || || | | ||| ||||| Sbjct 731023 GTCCAGAAATCCTCAATAAATACGTGGGCGAGTCTGAGGCCAACATCCGCAAGCTGTTTG 730964 Query 164678 AGGAGGCTGAAGAAGAACAAA 164698 || || ||||||||||||| Sbjct 730963 CTGATGCAGAAGAAGAACAAA 730943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595722369092400