Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq207 102 2e-16 seq452 87.8 5e-12 >seq207 Length=1524075 Score = 102 bits (112), Expect = 2e-16 Identities = 124/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449 |||||||| || || || | ||||| ||| || |||||||||| |||||||||||| Sbjct 1118668 ACAAATGCCAAGGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCCAATGGATCACGT 1118609 Query 111450 GACTTTCTAGATT--CAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTT 111507 || || || ||| ||| ||| ||| | || || || || ||| | |||||||||| Sbjct 1118608 GAATTCCTGGATAAGCAG--GGTTTTGGCACCAGAGAGGAGGGGGATTTGGGACCAGTTT 1118551 Query 111508 ACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 | || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 1118550 ATGGTTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 1118504 >seq452 Length=654506 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| | | || ||||| | || |||||||| ||||||||||| | ||| | || Sbjct 331644 GAACGTGTAGTAGCTTTTGCAGCTGTGGAAGGCATCTTCTTTTCTGGCTCTTTTGCTTCA 331703 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || |||||||| || ||| | | | | |||||||| || || ||||| || || | || Sbjct 331704 ATTTTTTGGCTGAAGAAAAGAGGATTAATGCCGGGACTCACTTTTTCTAACGAACTCATC 331763 Query 22609 AGCCGAGATGAGG 22621 || |||||||||| Sbjct 331764 AGTCGAGATGAGG 331776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303018129409598