Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq534 105 1e-17 seq629 91.5 3e-13 >seq534 Length=463462 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| | || |||||| | || ||||| |||||||||||||||||| | || || Sbjct 279332 GGTGAGAGAGTCGTTGCCTTTGCTGCAGTCGAAGGCATCTTCTTCTCGGGCTCGTTTGCT 279391 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 | ||||| ||||| ||| ||| || |||||| ||||| || ||||| || |||||| Sbjct 279392 GCTATCTTTTGGCTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTC 279451 Query 42816 ATCAGCAGGGACGAGG 42831 || ||||| || |||| Sbjct 279452 ATTAGCAGAGATGAGG 279467 >seq629 Length=368953 Score = 91.5 bits (100), Expect = 3e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 || |||| ||||||||| || || |||||||| || ||| ||||| |||| | |||| Sbjct 326968 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGAGCAAAGAAAAGGTCTCTGGCACGCTGC 327027 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || || |||||||||||| | | || | ||| ||||||| ||| | ||||| ||| Sbjct 327028 TCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAGATGCCAAGGC 327087 Query 245123 TCCATGTAGA 245132 |||| ||||| Sbjct 327088 TCCAGGTAGA 327097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944102064622640