Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq207 87.8 2e-12 >seq207 Length=1524075 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/140 (75%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 20534 GCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCT-GTG 20592 || ||||||||||||||||||||||| ||||| |||||||||||||||||| ||| ||| Sbjct 1118523 GCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCTCTGGTG 1118582 Query 20593 CGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | | | || || ||||||| || | || ||||| ||||| ||||| || || Sbjct 1118583 C-CAAAACCCTGCTTATCCAGGAATTCACGTGATCCATTGGCATCCCAAATCTTCACACC 1118641 Query 20653 TGTTCTTGAAAGCTCCCTGG 20672 || || |||||| ||| Sbjct 1118642 CTTTGCAGAGAGCTCCTTGG 1118661 Score = 82.4 bits (90), Expect = 7e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || || || ||||| || | ||| || || | || |||||||||||||| || ||||| Sbjct 1115138 AGCCCTGTGACATGGGCGATCATGTATGTGAGCAGCGAATAGCTGGCAATATTGAAAGGC 1115197 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACC 20349 ||||| | ||||| ||||| ||||||||||| || || || || | ||||| Sbjct 1115198 ACTCCTAGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACC 1115250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441261965772760