Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq174 100 1e-15 seq249 86.0 2e-11 >seq174 Length=2103569 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| |||| || | ||||| || || |||||||| || | || || || || || Sbjct 1764007 GTTACTAATGCTGTGGTCACTGTACCAGCCTATTTCAACGACTCCCAGCGCCAGGCTACA 1763948 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || || |||||||| ||||| || |||||| Sbjct 1763947 AAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAATTATCAATGAGCCGACAGCA 1763888 Query 451433 GCTGCTCTAGCATATGGACT 451452 |||||| |||| ||||| || Sbjct 1763887 GCTGCTATAGCCTATGGTCT 1763868 >seq249 Length=1325728 Score = 86.0 bits (94), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 451167 TTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTG 451226 |||||| | | || || | | |||| |||||| |||||||||| || | |||| Sbjct 209306 TTTCTTCTCAGGTTGTTGAAAAGAAAGCCAAGCCCCATATTCAAGTTGATGTTGGCGGTG 209247 Query 451227 AA---ACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAG 451283 | || ||||| ||||||||||||||||||||| ||||||| || || || ||||| | Sbjct 209246 GACAGACAAAAACATTTGCTCCTGAAGAAATTTCAGCTATGGTCCTGACAAAGATGAAGG 209187 Query 451284 AAACAGCAGAA 451294 |||| || ||| Sbjct 209186 AAACCGCGGAA 209176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975209869223612