Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq629 87.8 2e-12 seq534 82.4 9e-11 >seq629 Length=368953 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || || ||||| | ||||||||||||| ||| | || || ||||| Sbjct 325318 CTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCC 325377 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 |||||||| || || ||||| |||||| | |||||||| |||||||| || || || Sbjct 325378 CAAATTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGTTCC 325437 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||| ||||| || | || || || | ||| Sbjct 325438 AGTCTCTGTCTGGGATTCGATGATGGCGTACCA 325470 >seq534 Length=463462 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| | ||| |||||||| ||||| || || ||||| || |||| ||||| Sbjct 279467 CCTCATCTCTGCTAATGAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 279408 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||| |||| | ||||| ||| || || || ||||||||||| || || || ||||| Sbjct 279407 TCAGCCAAAAGATAGCAGCA-AACGAGCCCGAGAAGAAGATGCCTTCGACTGCAGCAAAG 279349 Query 117412 GCAA 117415 |||| Sbjct 279348 GCAA 279345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589832648446360