Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq174 107 2e-17 >seq174 Length=2103569 Score = 107 bits (118), Expect = 2e-17 Identities = 124/166 (75%), Gaps = 1/166 (1%) Strand=Plus/Minus Query 550372 TGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 ||||||| || | ||| ||||| |||| || | ||||||||||| ||||| || | Sbjct 1764027 TGCTTTTTTTTCCCCAGACTGTTACTAATGCTGTGGTCACTGTACCAGCCTATTTCAACG 1763968 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 |||| || || || ||||| |||||||||||| ||||| || || || || || || | Sbjct 1763967 ACTCCCAGCGCCAGGCTACAAAAGATGCTGGAACCATTGCAGGGCTCAACGTGCTGCGAA 1763908 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 |||||||||| || || || ||||| | || ||||| || || || Sbjct 1763907 TTATCAATGAGCCGACAGCAGCTGCTATAGCCTATGGTCTGGACAA 1763862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028233603078610