Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq367 132 9e-26 seq198 127 4e-24 seq629 84.2 4e-11 >seq367 Length=821710 Score = 132 bits (146), Expect = 9e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241415 AGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGT 241474 || |||| ||| ||||| || |||||||| || || || | | ||||| || ||| Sbjct 66384 AGCACCTTCTGCTTGAGCTGTGCCACCTGCTCGCGGAGCAGGCTGGCGGTGGAGGCCAGC 66325 Query 241475 CCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGT 241534 | | ||| | |||||| |||||| ||||||||||| |||| |||||| ||||| Sbjct 66324 TCGGTGTTCTGGCTCTTGAGGCTCTTCACCTTCTCCTCCAGGCGCGAGATGCGCTCCAGC 66265 Query 241535 TTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTG 241594 || | | |||||| |||| ||| || | |||||||| || | ||| || ||||||||| Sbjct 66264 TTCCTCTTGCGGCACTTGGAGGCGGCGATGCGGTTCCTCAGCCGCTTCCGCTCCGCCTTG 66205 Query 241595 ATGCGTTCCTGGTCCTCCATGTCGATCGGAGAC 241627 ||||| ||||| ||||||||||| || ||| Sbjct 66204 ATGCGCTCCTGCGTGTCCATGTCGATGGGCGAC 66172 >seq198 Length=1592851 Score = 127 bits (140), Expect = 4e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 241430 AGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGAC 241489 || |||| ||||| ||||||| | | ||||| || ||| | ||||| | Sbjct 864093 AGCTGGGTGACCTGTGCCCGCAGCAGGTTGGCGGTGGCGGCCAGCTCGGCGTTCTGCCCT 864152 Query 241490 TTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCAT 241549 |||||| ||||||| |||||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 864153 TTGAGCGCCTTCACCTTCTCCTCCAGCCGGGCGATGCGCTCCAGCTTGCGGCGGCGGCAC 864212 Query 241550 TTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCC 241609 |||| ||| || | ||||||||| || | ||| || |||||||| | || |||||| | Sbjct 864213 TTGGAGGCGGCGATGCGGTTCCGCAGCCGCTTGCGCTCCGCCTTCAGCCGCTCCTGGCTC 864272 Query 241610 TCCATGTCGATCGGAGAC 241627 || ||| | ||| ||| Sbjct 864273 TCGGCGTCCAGCGGCGAC 864290 >seq629 Length=368953 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 ||||||| |||||| || || || | ||| || || ||| ||||| |||| | | | Sbjct 326968 ACTCTCTTCATGAAGAGATCAGGAATCCAGAGAGCAAAGAAAAGGTCTCTGGCACGCTGC 327027 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || |||| ||| || | || ||||| |||||||||||| ||||| ||| Sbjct 327028 TCTTCTTTCCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAGATGCCAAGGC 327087 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| |||||||||||| || || || |||| Sbjct 327088 TCCAGGTAGATGGCAAAAGCTCCAGGTCTCT 327118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931298880469760