Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq534 93.3 8e-14 seq629 84.2 4e-11 >seq534 Length=463462 Score = 93.3 bits (102), Expect = 8e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| || || |||||||| ||| || |||||||| || ||||| ||| Sbjct 279344 GTTGCCTTTGCTGCAGTCGAAGGCATCTTCTTCTCGGGCTCGTTTGCTGCTATCTTTTGG 279403 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGA 26003 || ||| ||| ||| ||||| || ||| ||||| ||||| || ||||| ||||| || Sbjct 279404 CTGAAGAAGAGGGGCCTGATGCCTGGACTG-ACTTTCTCCAATGAACTCATTAGCAGAGA 279462 Query 26004 CGAGG 26008 |||| Sbjct 279463 TGAGG 279467 >seq629 Length=368953 Score = 84.2 bits (92), Expect = 4e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 |||||| || ||| ||||||||| | || |||||||| || |||||||| |||||||| Sbjct 325315 CACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGT 325374 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||| | | ||||| ||| || ||| || ||||||||| ||||| | || Sbjct 325375 CCCCAAATTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGT 325434 Query 221851 GCCAGTCTC 221859 |||||||| Sbjct 325435 TCCAGTCTC 325443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928611555460160