Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq629 100 3e-16 seq534 82.4 9e-11 >seq629 Length=368953 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || |||| ||||| |||||||||||||| || ||||| |||||||| Sbjct 325470 TGGTACGCCATCATCGAATCCCAGACAGAGACTGGAACACCTTACATGCTGTACAAGGAC 325411 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||| ||| |||||| || || |||||||||| || ||||| || ||||| || Sbjct 325410 TCTTGCAACCGGAAGAGCAATCAGCAGAATTTGGGGACCATCAAATGCAGCAATCTGTGT 325351 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || ||||| | ||||| || || |||||| Sbjct 325350 ACAGAAATAGTGGAGTATACCAGCAAAGATGAG 325318 >seq534 Length=463462 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| || || || ||||||||||| || || || ||| ||||| | |||| Sbjct 279345 TTGCCTTTGCTGCAGTCGAAGGCATCTTCTTCTCGGGCTCGTT-TGCTGCTATCTTTTGG 279403 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || || ||||| |||||||| ||| | ||||| Sbjct 279404 CTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTCATTAGCAGAGAT 279463 Query 65206 GAGG 65209 |||| Sbjct 279464 GAGG 279467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596419793916320