Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq588 89.7 5e-13 >seq588 Length=402874 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/174 (74%), Gaps = 6/174 (3%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAAC-TGCC 21183 ||||| ||||| || | ||||| ||| | ||| | |||||| |||| | | ||| |||| Sbjct 17619 AGCATATGGGGACCAACGTGCGACGGCCTCGATCGTATTGTTGAGCGCT-TCAACATGCC 17561 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA-GCTTGGT-C 21241 |||||| ||||| || |||||| || | |||||||||||||| || |||| ||| | | Sbjct 17560 AGAGCTGCAAGTTGGTGACTGGATCCTGTTTGAAAACATGGGTGCCTACACTGTTGCTGC 17501 Query 21242 AGCTCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 || |||| || || || || |||| | |||| || || || || || ||| Sbjct 17500 AG--CTTCTACTTTCAATGGATTCCAGAGGCCAACAATACATTACGTGATGTCA 17449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463429197905520